Pre_GI Gene

Host: NC_012791:721813 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:721813 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
721813722712900transcriptional regulator LysR familyQuickGO ontologyBLASTP
722888723499612Glutathione S-transferase domain proteinQuickGO ontologyBLASTP
7235557255612007oxidoreductase FADNADP-binding domain proteinQuickGO ontologyBLASTP
725621726007387transposase IS3IS911 family proteinQuickGO ontologyBLASTP
726004726351348IS66 Orf2 family proteinQuickGO ontologyBLASTP
7265337280081476transposase IS66QuickGO ontologyBLASTP
728047728574528hypothetical proteinBLASTP
728630728761132
7290917303621272major facilitator superfamily MFS_1QuickGO ontologyBLASTP
730456731313858GAF modulated transcriptional regulator LuxR familyQuickGO ontology
731468732385918Phenylacetaldoxime dehydrataseQuickGO ontologyBLASTP
732492733367876alphabeta hydrolase fold proteinQuickGO ontologyBLASTP
733604733736133
733791734474684NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
734651735598948transcriptional regulator LysR familyQuickGO ontologyBLASTP
735666735986321BLASTP
736039736527489hypothetical proteinBLASTP
736524737126603BLASTP
737132737614483binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
737961738605645hypothetical proteinBLASTP
7399787414951518hypothetical proteinBLASTP
742099742863765IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
7428607444731614Integrase catalytic regionQuickGO ontologyBLASTP
744551744700150hypothetical protein
744697744915219hypothetical protein
745084745932849hypothetical protein
7458807472981419integrase family proteinQuickGO ontologyBLASTP
7477487490491302methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
749089749580492Activator of Hsp90 ATPase 1 family proteinQuickGO ontologyBLASTP
749790750512723dienelactone hydrolaseQuickGO ontologyBLASTP
750509750892384protein of unknown function DUF427QuickGO ontologyBLASTP
7510217521091089MscS Mechanosensitive ion channelQuickGO ontologyBLASTP
7520947534821389hypothetical protein
753551753943393transcriptional regulator TraRDksA familyQuickGO ontologyBLASTP
753969754337369hypothetical protein
754356754961606putative cytochrome c oxidase subunit IQuickGO ontologyBLASTP
7549587569461989cytochrome c oxidase subunit IQuickGO ontologyBLASTP
756946757914969cytochrome c oxidase subunit IIQuickGO ontologyBLASTP
757914758483570cytochrome c class IQuickGO ontologyBLASTP
758480759328849extracellular solute-binding protein family 3QuickGO ontologyBLASTP
7593067611471842PQQ-dependent dehydrogenase methanolethanol familyQuickGO ontologyBLASTP