Pre_GI Gene

Host: NC_012808:1220378 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012808:1220378 Methylobacterium extorquens AM1, complete genome

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
121787712203812505Cellulose synthase UDP-formingQuickGO ontologyBLASTP
122037812230232646putative CelB-like proteinQuickGO ontologyBLASTP
122321812243361119putative cellulase endoglucanase celCQuickGO ontologyBLASTP
122432112263842064hypothetical proteinBLASTP
122638112273941014hypothetical proteinBLASTP
1229126122922095ribosomal RNA 5SQuickGO ontologyBLASTP
1232516123259176tRNA-AlaQuickGO ontologyBLASTP
123500712361761170putative NADH dehydrogenase ubiquinone 1 alpha subcomplexQuickGO ontologyBLASTP
12364281237096669hypothetical proteinBLASTP
123733912385081170putative transporter major facilitator superfamilyQuickGO ontologyBLASTP
123859212407692178Primosome factor N replication factor YQuickGO ontologyBLASTP
12408541241216363hypothetical proteinBLASTP
12413061241686381hypothetical proteinBLASTP
12421081242359252hypothetical proteinBLASTP
124247812434881011putative short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
12436341244245612putative Isochorismatase hydrolaseQuickGO ontologyBLASTP
124428812454121125putative zink-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
12455901246198609hypothetical proteinBLASTP
12464641247276813Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
12473451248337993putative short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
12484571248600144hypothetical proteinBLASTP
124873412503651632putative ubiquinone biosynthesis proteinQuickGO ontologyBLASTP
12505261251005480hypothetical proteinBLASTP
1251485125157995ribosomal RNA 5SQuickGO ontologyBLASTP
1254875125495076tRNA-AlaQuickGO ontologyBLASTP
12574901257816327hypothetical protein
12592201259387168hypothetical protein
12601061260429324transcriptional regulator ArsR familyQuickGO ontologyBLASTP
126043612617521317putative integral membrane sensor signal transduction histidine kinase precursorQuickGO ontologyBLASTP
12617491262411663DNA-binding response regulator in two-component regulatory systemQuickGO ontologyBLASTP
126251412642531740putative fused thioldisulfide interchange protein precursorQuickGO ontologyBLASTP
12642941264929636putative thioredoxin domain protein precursorQuickGO ontologyBLASTP
12649561265777822hypothetical proteinBLASTP
12657611266225465hypothetical proteinBLASTP
12664691266894426hypothetical proteinBLASTP
12668981267347450hypothetical proteinBLASTP
12673441268153810hypothetical proteinBLASTP
12681751269086912beta-lactamase domain protein putative hydroxyacylglutathione hydrolaseQuickGO ontologyBLASTP
12690831269484402rhodanese domain protein putative sulfur transferaseQuickGO ontologyBLASTP