Pre_GI Gene

Host: NC_012912:1701231 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012912:1701231 Dickeya zeae Ech1591, complete genome

Host Lineage: Dickeya zeae; Dickeya; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile. The causal agent of onion soft rot. Plant pathogen.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
170003217012341203conjugation TrbI family proteinQuickGO ontologyBLASTP
17012311702121891P-type conjugative transfer protein VirB9QuickGO ontologyBLASTP
17021211702804684VirB8 family proteinQuickGO ontologyBLASTP
17027971702937141putative conjugal transfer proteinQuickGO ontologyBLASTP
170302517040531029TrbLVirB6 plasmid conjugal transfer proteinQuickGO ontologyBLASTP
17040651704289225conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
17043001705016717type IV secretion system family proteinQuickGO ontologyBLASTP
170504117077882748CagE TrbE VirB component of type IV transporter systemQuickGO ontologyBLASTP
17077981708073276Conjugal transfer protein TrbCQuickGO ontologyBLASTP
17080931708740648Lytic transglycosylase catalyticQuickGO ontologyBLASTP
17088101709043234hypothetical proteinBLASTP
170936317104001038hypothetical proteinBLASTP
171039417126702277helicase domain proteinQuickGO ontologyBLASTP
171275117139591209transposase mutator typeQuickGO ontologyBLASTP
17144531714662210transcriptional regulator TraRDksA familyQuickGO ontologyBLASTP
17146521715236585hypothetical proteinBLASTP
17152531715447195phage transcriptional regulator AlpAQuickGO ontologyBLASTP
17159421716199258transcriptional regulator XRE familyQuickGO ontologyBLASTP
17163131716591279transcriptional regulator XRE familyQuickGO ontologyBLASTP
17167251717012288putative transcriptional regulator NlpQuickGO ontologyBLASTP
17173451717590246transcriptional regulator XRE familyQuickGO ontologyBLASTP
17179371718455519type VI secretion system effector Hcp1 familyQuickGO ontologyBLASTP
171856817204211854type VI secretion system Vgr family proteinQuickGO ontologyBLASTP
17204351720842408Domain of unknown function DUF1795QuickGO ontologyBLASTP
172085417252274374YD repeat proteinQuickGO ontologyBLASTP
17252241725649426hypothetical proteinBLASTP
17257541726470717BLASTP
17264671726898432hypothetical proteinBLASTP
17271471728073927hypothetical proteinBLASTP
17290911729402312protein of unknown function DUF736QuickGO ontologyBLASTP
17293661729629264BLASTP
17301761730448273putative transcriptional regulator NlpQuickGO ontologyBLASTP
17306741730910237putative transcriptional regulatorQuickGO ontologyBLASTP
17311231731410288transcriptional regulator XRE familyQuickGO ontologyBLASTP
173152417327951272integrase family proteinQuickGO ontologyBLASTP
1732957173303276tRNA-AsnQuickGO ontologyBLASTP
17334171733692276transcriptional regulator LysR familyQuickGO ontologyBLASTP
173378817351971410amino acid permease-associated regionQuickGO ontologyBLASTP
1735510173558576tRNA-LysQuickGO ontologyBLASTP
17358711736095225hypothetical proteinBLASTP
17367461737408663two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
173740117392331833excinuclease ABC C subunitQuickGO ontologyBLASTP
17392911739839549CDP-diacylglycerolglycerol-3-phosphate 3-phosphatidyltransferaseQuickGO ontologyBLASTP
1739981174005676tRNA-GlyQuickGO ontology
1740083174015674tRNA-CysQuickGO ontologyBLASTP
1740165174025187tRNA-LeuQuickGO ontologyBLASTP
17407291741118390BLASTP
174116617428541689hypothetical proteinBLASTP
17429411743207267putative integraseQuickGO ontologyBLASTP
17433081743874567hypothetical proteinBLASTP
17441851744625441putative phage encoded host lysis regulatory proteinQuickGO ontologyBLASTP
17446221745113492LysozymeQuickGO ontologyBLASTP
17451031745414312holin family 2QuickGO ontologyBLASTP
174603817473151278Parallel beta-helix repeat proteinQuickGO ontologyBLASTP
174738617486661281CellulaseQuickGO ontologyBLASTP
17492541749631378cytochrome b562QuickGO ontologyBLASTP