Pre_GI Gene

Host: NC_012943:2525835 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012943:2525835 Mycobacterium tuberculosis KZN 1435 chromosome, complete genome

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: M. tuberculosis strain KZN 1435 was isolated from a patient in KwaZulu-Natal, South Africa. This strain is multidrug-resistant (resistant to isoniazid and rifampin). This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. This species is responsible for more morbidity in humans than any other bacterial disease. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. The envelope contains the typical polypeptide layer, the peptidoglycan layer, and free lipids. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. These fatty acid-carbohydrate complexes inhibit phago-lysosome fusion and are often considered to be indicators of virulent strains. The cell envelope also includes adhesins and aggressions, but does not contain any known toxins. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25258352526230396hypothetical proteinBLASTP
25262352526582348hypothetical proteinBLASTP
25266152526977363hypothetical proteinBLASTP
252736025291351776macrolide-transport ATP-binding protein ABC transporterQuickGO ontologyBLASTP
252915025304421293cytochrome P450 139 cyp139QuickGO ontologyBLASTP
253042525314861062chalcone synthase pks11QuickGO ontologyBLASTP
253163325346863054polyketide synthaseQuickGO ontologyBLASTP
253469225362241533polyketide synthaseQuickGO ontologyBLASTP
253620025410084809polyketide synthaseQuickGO ontologyBLASTP
254102825474086381polyketide synthaseQuickGO ontologyBLASTP
254749125485521062chalcone synthase pks10QuickGO ontologyBLASTP