Pre_GI Gene

Host: NC_012947:3015985 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:3015985 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30159853016446462lysis proteinQuickGO ontologyBLASTP
30164433016919477LysozymeQuickGO ontologyBLASTP
30169033017226324phage holin lambda familyQuickGO ontologyBLASTP
30175973017791195hypothetical protein
30179033018526624antitermination proteinQuickGO ontologyBLASTP
30185233019326804phosphoprotein phosphataseQuickGO ontologyBLASTP
30193233020024702replication P family proteinQuickGO ontologyBLASTP
30200213020920900phage replication protein OQuickGO ontologyBLASTP
30209533021252300CII family proteinQuickGO ontologyBLASTP
30213683021553186Cro proteinQuickGO ontologyBLASTP
30216343022284651XRE family transcriptional regulatorQuickGO ontologyBLASTP
30225993022898300phage regulatory protein NQuickGO ontologyBLASTP
30229773023177201restriction inhibitor protein ral antirestriction proteinQuickGO ontologyBLASTP
30233603023728369hypothetical proteinBLASTP
30238013023965165Lambda phage regulatory protein CIIIQuickGO ontologyBLASTP
30238083024077270lambda KilQuickGO ontologyBLASTP
30240323024448417Host-nuclease inhibitor GamQuickGO ontologyBLASTP
30244543025239786phage recombination protein BetQuickGO ontologyBLASTP
30252363025916681exodeoxyribonuclease lambda-inducedQuickGO ontologyBLASTP
30259133026095183hypothetical proteinBLASTP
30260683026259192hypothetical proteinBLASTP
30268693027417549hypothetical proteinBLASTP
30276093027890282hypothetical proteinBLASTP
30279793028146168hypothetical proteinBLASTP
30281863028404219excisionaseQuickGO ontologyBLASTP
30283823029305924lambda integraseQuickGO ontologyBLASTP
302931330319642652DNA-directed RNA polymeraseQuickGO ontologyBLASTP
30319953032444450beta-galactosidaseQuickGO ontologyBLASTP
303256730336581092lac repressorQuickGO ontologyBLASTP
30337373033898162BLASTP
303403630353191284pectinesteraseQuickGO ontologyBLASTP
30355603036180621BLASTP
30363823037134753phosphoglyceromutaseQuickGO ontologyBLASTP
303729230383441053phospho-2-dehydro-3-deoxyheptonate aldolaseQuickGO ontologyBLASTP