Pre_GI Gene

Host: NC_012962:1068102 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012962:1068102 Photorhabdus asymbiotica, complete genome

Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
106810210695771476succinate-semialdehyde dehydrogenase nadp-dependent activit succinate-semialdehyde dehydrogenaseQuickGO ontologyBLASTP
106957410707971224bicyclomycin resistance protein transmembrane proteinQuickGO ontologyBLASTP
107080010711863875-carboxymethyl-2-hydroxymuconate isomeraseQuickGO ontologyBLASTP
10712001072078879homoprotocatechuate dyoxygenaseQuickGO ontologyBLASTP
1072143107360914675-carboxy-2-hydroxymuconate semialdehyde dehydrogenaseQuickGO ontologyBLASTP
107360610743707654-hydroxyphenylacetate degradation bifunctional isomerasedecarboxylaseQuickGO ontologyBLASTP
10743671074999633homoprotocatechuate catabolism bifunctional isomerasedecarboxylaseQuickGO ontologyBLASTP
10750511075218168hypothetical protein
10752341075389156hypothetical protein
10755131075950438homoprotocatechuate degradative operon repressorQuickGO ontologyBLASTP
10761831076482300hypothetical proteinBLASTP
10764901076729240hypothetical protein
10775161077863348hypothetical proteinBLASTP
107790810789301023putative phage integraserecombinaseQuickGO ontologyBLASTP
107914910818482700putative DNA primase-like proteinQuickGO ontologyBLASTP
10819621082354393putative phage regulatory proteinQuickGO ontologyBLASTP
10824311082754324putative endoribonuclease SymEQuickGO ontologyBLASTP
10827681082965198hypothetical proteinBLASTP
10830121083359348hypothetical proteinBLASTP
10833641083645282hypothetical proteinBLASTP
10839131084239327hypothetical proteinBLASTP
108471510861331419putative integraserecombinaseQuickGO ontologyBLASTP
108659410893622769putative DNA primase-like proteinQuickGO ontologyBLASTP
10894651089866402putative phage regulatorQuickGO ontologyBLASTP
10899391090262324putative endoribonuclease SymE2QuickGO ontologyBLASTP
10905241091066543hypothetical proteinBLASTP
10910801091352273hypothetical proteinBLASTP
109248810939061419putative integraserecombinaseQuickGO ontologyBLASTP
109436710971352769putative DNA primase-like proteinQuickGO ontologyBLASTP
10972381097639402putative phage regulatorQuickGO ontologyBLASTP
10977121098035324putative endoribonuclease SymE3QuickGO ontologyBLASTP
10982971098839543hypothetical proteinBLASTP
10988531099125273Putative phage cell wall peptidaseQuickGO ontologyBLASTP
10994251099811387hypothetical proteinBLASTP
10998051100152348hypothetical proteinBLASTP
110019711012191023Phage integraseQuickGO ontologyBLASTP
110143811041372700dnag primase-like proteinQuickGO ontologyBLASTP
11042511104643393hypothetical proteinBLASTP
11047201105043324putative endoribonuclease SymE4QuickGO ontologyBLASTP
11053011105648348hypothetical proteinBLASTP
110565311100084356hypothetical proteinBLASTP
11100261110445420hypothetical proteinBLASTP
111050011123951896hypothetical proteinBLASTP
111314011138837444-phosphopantetheinyl tranferaseQuickGO ontologyBLASTP
111393011149581029putative major fimbrial subunitQuickGO ontologyBLASTP
111498711174672481putative outer membrane proteinQuickGO ontologyBLASTP
11174911118159669uncharacterized fimbrial chaperone yrai precursorQuickGO ontologyBLASTP
1118103111815957
11181981118725528major fimbrial subunit precursorQuickGO ontologyBLASTP
11209511121562612putative transmembrane proteinQuickGO ontologyBLASTP
11215931121697105hypothetical proteinBLASTP