Pre_GI Gene

Host: NC_012967:1967675 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:1967675 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
196767519688861212tyrosine transporterQuickGO ontologyBLASTP
19689481969613666hypothetical proteinBLASTP
1969809196989587tRNA-LeuQuickGO ontologyBLASTP
1969908196998174tRNA-CysQuickGO ontology
1970035197011076tRNA-GlyQuickGO ontology
19702621970810549phosphatidylglycerophosphate synthetaseQuickGO ontologyBLASTP
197086719726331767excinuclease ABC subunit CQuickGO ontologyBLASTP
19726961973205510response regulatorQuickGO ontologyBLASTP
19733271973602276IS1 protein InsAQuickGO ontologyBLASTP
19735211974024504IS1 protein InsBQuickGO ontologyBLASTP
19740261974685660chaperone protein HchAQuickGO ontologyBLASTP
197479319761511359putative sensory kinase in two-component regulatory system with YedWQuickGO ontologyBLASTP
19761511976822672transcriptional regulatory protein YedWQuickGO ontologyBLASTP
19769551977368414hypothetical proteinBLASTP
197747719784811005putative sulfite oxidase subunit YedYQuickGO ontologyBLASTP
19784821979117636putative sulfite oxidase subunit YedZQuickGO ontologyBLASTP
19793741980024651hypothetical proteinBLASTP
19803671980897531putative cytochromeQuickGO ontologyBLASTP
1981467198155690tRNA-SerQuickGO ontologyBLASTP
19816501982447798hypothetical proteinBLASTP
1982548198262376tRNA-AsnQuickGO ontologyBLASTP
198286219900137152adhesinQuickGO ontologyBLASTP
199164219929581317shikimate transporterQuickGO ontologyBLASTP
199306019945141455AMP nucleosidaseQuickGO ontologyBLASTP
19948571995573717hypothetical proteinBLASTP
1996027199610276tRNA-AsnQuickGO ontologyBLASTP
199620319978461644hypothetical proteinBLASTP
1997851199792676tRNA-AsnQuickGO ontologyBLASTP
19979641998914951transcriptional regulator CblQuickGO ontologyBLASTP
19990161999933918nitrogen assimilation transcriptional regulatorQuickGO ontologyBLASTP
2000260200033576tRNA-AsnQuickGO ontologyBLASTP
20003912001323933hypothetical proteinBLASTP
200138820024671080nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseQuickGO ontologyBLASTP
20024792003222744cobalamin synthaseQuickGO ontologyBLASTP
20032192003764546adenosylcobinamide kinaseadenosylcobinamide-phosphate guanylyltransferaseQuickGO ontologyBLASTP