Pre_GI Gene

Host: NC_012988:4292815 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012988:4292815 Methylobacterium extorquens DM4, complete genome

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Methylobacterium extorquens DM4 was isolated from soil contaminated with halogenated (chlorine-containing) hydrocarbons. This organism is able to use dichloromethane as a sole carbon and energy source. Dichloromethane, an industrial solvent, is toxic and carcinogenic. This compound is water soluble and can easily contaminate groundwater. Methylobacterium chloromethanicum was isolated from soil at a petrochemical factory in Tatarstan, Russia. This organism is able to grow using chloromethane as the sole carbon and energy source.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
429281542955442730hypothetical proteinBLASTP
42955414296212672hypothetical protein
42968514297093243hypothetical protein
42972534298182930transposase of ISMdi4 IS481 familyQuickGO ontologyBLASTP
42981874298393207hypothetical proteinBLASTP
42988504299455606hypothetical proteinBLASTP
42994404299727288hypothetical proteinBLASTP
43002104300521312hypothetical proteinBLASTP
43006074300897291hypothetical proteinBLASTP
4300703430080199hypothetical protein
43010944301471378hypothetical proteinBLASTP
43016714301949279hypothetical protein
43020974302396300hypothetical protein
43028014303109309hypothetical protein
43046814305517837transposase of ISMex11 IS3 family ORF 2QuickGO ontologyBLASTP
43055144305780267transposase of ISMex11 IS3 family ORF 1QuickGO ontologyBLASTP
43057614305991231hypothetical proteinBLASTP
43063594306526168hypothetical protein
43070894307232144hypothetical proteinBLASTP
43075314308130600hypothetical proteinBLASTP
43082324308480249hypothetical proteinBLASTP
43086824308948267hypothetical proteinBLASTP
43091114309356246hypothetical protein
4309611430969181hypothetical protein
43099814310325345hypothetical protein
43104454311263819hypothetical protein
43112804312209930transposase of ISMex17 IS110 familyQuickGO ontologyBLASTP
43130064313908903Zinc-containing alcohol dehydrogenase superfamilyQuickGO ontologyBLASTP
43140344314873840NADP oxidoreductase coenzyme F420-dependentQuickGO ontologyBLASTP
43148744315272399transcriptional regulatorQuickGO ontologyBLASTP
43160144316916903N-carbamyl-D-amino acid amidohydrolaseQuickGO ontologyBLASTP
431697443181311158extracellular ligand-binding receptorQuickGO ontologyBLASTP
43181624319046885Branched-chain amino acid ABC transporter permeaseQuickGO ontologyBLASTP
431903943208921854branched-chain amino acid ABC transporter permeaseATP-binding proteinQuickGO ontologyBLASTP
43208894321602714leucineisoleucinevaline ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
43215994322306708urease subunits gammabetaQuickGO ontologyBLASTP
432230843240231716urease subunit alphaQuickGO ontologyBLASTP
43240204324643624urease accessory protein UreGQuickGO ontologyBLASTP
43246434325485843urease accessory protein UreDQuickGO ontologyBLASTP
43255644325980417urease accessory protein UreEQuickGO ontologyBLASTP
43259704326677708urease accessory protein UreFQuickGO ontologyBLASTP
43266834327192510aliphatic amidase regulator AmiRQuickGO ontologyBLASTP
432728943283681080aliphatic amidase expression-regulating protein AmiCQuickGO ontologyBLASTP
432851243300681557ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
43300654330340276hypothetical protein
433084043323391500transposase of ISMdi7 IS21 family ORF 1QuickGO ontologyBLASTP
43323364333178843transposase of ISMdi7 IS21 family ORF 2QuickGO ontologyBLASTP
43332314333512282hypothetical protein
43354454335708264hypothetical protein
43358394336102264hypothetical protein
43361214336261141hypothetical protein
43363794336588210hypothetical protein
433665343384221770hypothetical proteinBLASTP
43385004338937438hypothetical proteinBLASTP
43390144339370357hypothetical proteinBLASTP
433962043408161197DNA-directed DNA polymeraseQuickGO ontologyBLASTP
43408734341031159hypothetical protein
43410624341859798hypothetical protein
43418614342121261hypothetical protein
43421184342360243hypothetical protein
43423574342668312hypothetical protein
43429044343815912antirepressor proteinQuickGO ontologyBLASTP
43438674344379513hypothetical protein