Pre_GI Gene

Host: NC_013093 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013093:832971 Actinosynnema mirum DSM 43827, complete genome

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
832249832974726two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
8329718342541284histidine kinaseQuickGO ontologyBLASTP
834452835255804NUDIX hydrolaseQuickGO ontologyBLASTP
835671836636966tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
836836837138303YCII-related proteinQuickGO ontologyBLASTP
837484837645162hypothetical protein
8378108397111902GTP-binding protein TypAQuickGO ontologyBLASTP
8399878416871701extracellular solute-binding protein family 5QuickGO ontologyBLASTP
8419888438021815extracellular solute-binding protein family 5QuickGO ontologyBLASTP
843963844961999binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
844963845901939binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
8458988470761179oligopeptidedipeptide ABC transporter ATPase subunitQuickGO ontologyBLASTP
8470738481221050oligopeptidedipeptide ABC transporter ATPase subunitQuickGO ontologyBLASTP
8482508491018521D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylaseQuickGO ontologyBLASTP
849200849580381hypothetical protein
8497618508251065hypothetical protein
850804851637834GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
8517968521223274Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
8521198532101092aminotransferase class I and IIQuickGO ontologyBLASTP
8532928542669752345-tetrahydropyridine-2-carboxylateN-succin yltransferaseQuickGO ontologyBLASTP
8542838553621080succinyl-diaminopimelate desuccinylaseQuickGO ontologyBLASTP
855382856149768hypothetical proteinBLASTP
856149856691543hypothetical proteinBLASTP