Pre_GI Gene

Host: NC_013093:3996197 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013093:3996197 Actinosynnema mirum DSM 43827, complete genome

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
399619739975701374AmidaseQuickGO ontologyBLASTP
39977703998660891hypothetical proteinBLASTP
39988613999451591hypothetical proteinBLASTP
39995594000083525protein of unknown function DUF1470QuickGO ontologyBLASTP
40000984000286189hypothetical protein
40002994000964666transcriptional regulator TetR familyQuickGO ontologyBLASTP
40011874001552366hypothetical protein
40018704002547678hypothetical protein
40025354003248714short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
40032084004002795methionine aminopeptidase type IQuickGO ontologyBLASTP
40040494004309261transcriptional regulator XRE familyQuickGO ontologyBLASTP
400432740053371011Helix-turn-helix type 11 domain proteinQuickGO ontologyBLASTP
400537040066561287monooxygenase FAD-bindingQuickGO ontologyBLASTP
40067694007518750transcriptional regulator DeoR familyQuickGO ontologyBLASTP
400757940091561578NUDIX hydrolaseQuickGO ontologyBLASTP
40091284009751624hypothetical protein
40097784010566789Exonuclease RNase T and DNA polymerase IIIQuickGO ontologyBLASTP
40106704010912243hypothetical protein
40119594012933975integrase family proteinQuickGO ontologyBLASTP
40130294013874846transcriptional regulator AraC familyQuickGO ontologyBLASTP
40139414014522582hypothetical proteinBLASTP
40145964015054459hypothetical protein
40153014016104804hypothetical proteinBLASTP
40161104016676567hypothetical proteinBLASTP
401678840187101923peptidase S9 prolyl oligopeptidase active site domain proteinQuickGO ontologyBLASTP
40187074019609903peptidase U61 LD-carboxypeptidase AQuickGO ontologyBLASTP