Pre_GI Gene

Host: NC_013093:5653093 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013093:5653093 Actinosynnema mirum DSM 43827, complete genome

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
56525305653096567hypothetical protein
565309356544481356hypothetical protein
56544485655251804ABC transporter relatedQuickGO ontologyBLASTP
56554015656192792hypothetical protein
56561895656740552RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
56569775657804828hypothetical proteinBLASTP
565796156593941434NADP transhydrogenase AB-specificQuickGO ontologyBLASTP
56593915659765375NADNADP transhydrogenase alpha subunit-like proteinQuickGO ontologyBLASTP
565976556608861122alanine dehydrogenasePNT domain proteinQuickGO ontologyBLASTP
56611195661763645GCN5-related N-acetyltransferaseQuickGO ontology
56617795662504726hypothetical proteinBLASTP
566250456638711368Nitrite reductase NO-formingQuickGO ontologyBLASTP
566386856651091242hypothetical proteinBLASTP
566510656661881083hypothetical proteinBLASTP
56661885666874687putative transcriptional regulatorQuickGO ontologyBLASTP
566693556689141980peptidase M48 Ste24pQuickGO ontology
56689045669356453ubiquinol-cytochrome c chaperoneQuickGO ontology
566963256721062475peptidase M14 carboxypeptidase AQuickGO ontologyBLASTP
56722315672353123hypothetical protein
56724565672983528Calcium-binding EF-hand-containing proteinQuickGO ontologyBLASTP
56729875673928942methyltransferaseQuickGO ontologyBLASTP
56740085674184177transposase IS4 family proteinQuickGO ontologyBLASTP
56742345674683450DoxX family proteinQuickGO ontologyBLASTP
56748805675425546transcriptional regulator TetR familyQuickGO ontologyBLASTP
567586456795143651hypothetical proteinBLASTP
56794955680073579hypothetical protein