Pre_GI Gene

Host: NC_013199:282901 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013199:282901 Lactobacillus rhamnosus Lc 705, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
282901283683783glycosyltransferase related enzymeQuickGO ontologyBLASTP
283702284439738conserved hypothetical protein integral membrane protein by homologyQuickGO ontologyBLASTP
284536284868333hypothetical proteinBLASTP
284998285597600signal peptidase I Leader peptidase I SpaseIQuickGO ontologyBLASTP
285674286612939ADP-ribosylglycohydrolaseQuickGO ontologyBLASTP
2870252885721548ABC transporter with duplicated ATPase domains ATPase componentQuickGO ontologyBLASTP
288708289454747methylase for ubiquinonemenaquinone biosynthesisQuickGO ontologyBLASTP
290067290252186hypothetical proteinBLASTP
290203290406204hypothetical proteinBLASTP
290360290677318hypothetical proteinBLASTP
290662290856195hypothetical proteinBLASTP
291143291541399hypothetical proteinBLASTP
291517291729213hypothetical proteinBLASTP
292136292531396hypothetical proteinBLASTP
293446293745300lipoproteinQuickGO ontologyBLASTP
293883294221339metal-dependent RNase consists of a metallo-beta-lactamase domain and an RNA-binding KH domainQuickGO ontologyBLASTP
294863295183321thiol-disulfide isomerase and thioredoxinsQuickGO ontologyBLASTP
295207295956750conserved hypothetical protein membrane protein by homologyQuickGO ontologyBLASTP
295974296432459conserved hypothetical protein integral membrane protein by homologyQuickGO ontologyBLASTP
2971212983141194high affinity branched-chain amino acid ABC transporter amino acid-binding protein periplasmic componentQuickGO ontologyBLASTP
298351299229879high affinity branched-chain amino acid ABC transporter permease componentQuickGO ontologyBLASTP
299234300184951high affinity branched-chain amino acid ABC transporter permease componentQuickGO ontologyBLASTP
300181300966786branched-chain amino acid ABC transporter ATPase componentQuickGO ontologyBLASTP
300959301675717branched-chain amino acid ABC transporter ATPase componentQuickGO ontologyBLASTP