Pre_GI Gene

Host: NC_013203 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013203:472679 Atopobium parvulum DSM 20469, complete genome

Host Lineage: Atopobium parvulum; Atopobium; Coriobacteriaceae; Coriobacteriales; Actinobacteria; Bacteria

General Information: Temp: Mesophile; Temp: 37 - 45C; Habitat: Host, Human airways, Oral microflora. A member of the lactic acid group of bacteria, commonly isolated from the gingival crevices of the human oral cavity. This organism has also occasionally been isolated from dental abscesses.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
472679473620942transcriptional regulator LysR familyQuickGO ontologyBLASTP
473622474362741pseudouridine synthaseQuickGO ontologyBLASTP
4744474760421596Ferredoxin hydrogenaseQuickGO ontologyBLASTP
476189476497309hypothetical protein
4767744787411968Glucan-binding protein CQuickGO ontologyBLASTP
478840479493654HAD-superfamily hydrolase subfamily IA variant 3QuickGO ontologyBLASTP
479696479941246hypothetical protein
4799384814401503Dipeptidylaminopeptidaseacylaminoacyl- peptidase-like proteinQuickGO ontologyBLASTP
4817014829391239serinethreonine protein kinaseQuickGO ontologyBLASTP
482941483843903ABC transporter relatedQuickGO ontologyBLASTP
483833484621789ABC-2 type transporterQuickGO ontologyBLASTP
4848034866291827aspartyl-tRNA synthetaseQuickGO ontologyBLASTP
4866754884771803ABC transporter relatedQuickGO ontologyBLASTP
4884704902901821ABC transporter relatedQuickGO ontologyBLASTP
490302490673372CrcB proteinQuickGO ontologyBLASTP
490778491623846transcriptional regulator AraC familyQuickGO ontologyBLASTP
4916534931101458drug resistance transporter EmrBQacA subfamilyQuickGO ontologyBLASTP
493285494046762phosphoglycerate mutase 1 familyQuickGO ontologyBLASTP
494347494550204hypothetical protein
4946794959921314glutamine synthetase catalytic regionQuickGO ontologyBLASTP