Pre_GI Gene

Host: NC_013315:1370000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013315:1370000 Clostridium difficile CD196 chromosome, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
137005313718761824mannosyl-glycoprotein endo-beta-N-acetylglucosamidaseQuickGO ontologyBLASTP
137209113763894299DNA polymerase III PolC-typeQuickGO ontologyBLASTP
13765931377054462hypothetical proteinBLASTP
137708413782381155transcription elongation proteinQuickGO ontologyBLASTP
13782451378526282hypothetical proteinBLASTP
13785161378827312ribosomal proteinQuickGO ontologyBLASTP
137884913807891941translation initiation factor IF-2QuickGO ontologyBLASTP
13808321381212381ribosome-binding factor AQuickGO ontologyBLASTP
138116613821761011RNA-binding proteinQuickGO ontologyBLASTP
13821891383094906tRNA pseudouridine synthase BQuickGO ontologyBLASTP
13832251384154930riboflavin biosynthesis proteinQuickGO ontologyBLASTP
1384154138425299hypothetical protein
1384258138451525830S ribosomal protein S15QuickGO ontologyBLASTP
13847551385600846hypothetical proteinBLASTP
138572513878362112polynucleotide phosphorylasepolyadenylaseQuickGO ontologyBLASTP