Pre_GI Gene

Host: NC_013315:1679000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013315:1679000 Clostridium difficile CD196 chromosome, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16795551680328774hypothetical proteinBLASTP
16803341681137804phage anti-repressorQuickGO ontologyBLASTP
16811091681786678hypothetical protein
16828591683296438hypothetical proteinBLASTP
168330816844741167hypothetical proteinBLASTP
16848771685449573hypothetical proteinBLASTP
16854721686044573hypothetical proteinBLASTP
168604416880021959dna-directed dna polymerase iQuickGO ontologyBLASTP
168801416904312418virulence-associated protein eQuickGO ontologyBLASTP
169098816923581371phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseQuickGO ontologyBLASTP
16925121692991480hypothetical proteinBLASTP
16932741693726453hypothetical proteinBLASTP
16940181694992975hypothetical proteinBLASTP
16950131695522510hypothetical protein
16955921696284693phage DNA-binding proteinQuickGO ontologyBLASTP
169626216975151254phage terminase large subunitQuickGO ontologyBLASTP