Pre_GI Gene

Host: NC_013316 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013316:4018451 Clostridium difficile R20291, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40184514019155705hypothetical proteinBLASTP
40191784020011834putative corrinporphyrin methyltransferaseQuickGO ontologyBLASTP
40200124020758747hypothetical proteinBLASTP
40208364021729894putative signal peptidase IIQuickGO ontologyBLASTP
40217264022661936putative DNA polymerase III delta subunitQuickGO ontologyBLASTP
40226644023368705putative thymidylate kinaseQuickGO ontologyBLASTP
402348440248931410putative arginine decarboxylaseQuickGO ontologyBLASTP
40250484025239192hypothetical proteinBLASTP
402535940254751175S ribosomal RNAQuickGO ontologyBLASTP
40255484028500295323S ribosomal RNAQuickGO ontologyBLASTP
40286914030315162516S ribosomal RNAQuickGO ontologyBLASTP
40305094030790282hypothetical proteinBLASTP
403101240325411530lysyl-tRNA synthetaseQuickGO ontologyBLASTP
40325564033035480transcription elongation factor greaQuickGO ontologyBLASTP
40331444034112969tRNA-dihydrouridine synthaseQuickGO ontologyBLASTP
40342494035019771hypothetical proteinBLASTP
40350384035655618hypothetical proteinBLASTP
40358124036780969putative peptidaseQuickGO ontologyBLASTP
40367734037750978BirA bifunctional protein includes biotin operon repressor and biotin--acetyl-CoA-carboxylase synthetaseQuickGO ontologyBLASTP
403806440400581995cell division proteinQuickGO ontologyBLASTP
404006840414561389putative ATPaseQuickGO ontologyBLASTP