Pre_GI Gene

Host: NC_013316:2585666 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013316:2585666 Clostridium difficile R20291, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25856662586361696ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
25863482587079732hypothetical proteinBLASTP
25873942588194801hypothetical proteinBLASTP
25887352589451717two-component response regulatorQuickGO ontologyBLASTP
258943225910121581two-component sensor histidine kinaseQuickGO ontologyBLASTP
259132425928261503putative phosphoglucomutaseQuickGO ontologyBLASTP
25929362593601666putative ribulose-phosphate 3-epimeraseQuickGO ontologyBLASTP
25936402594086447ribose-5-phosphate isomerase 1QuickGO ontologyBLASTP
25942612595181921transketolaseQuickGO ontologyBLASTP
25951842595996813transketolaseQuickGO ontologyBLASTP
259608825971191032putative carbohydrate dehydrogenaseQuickGO ontologyBLASTP
259711925981711053putative galactitol-1-phosphate 5-dehydrogenaseQuickGO ontologyBLASTP
259830125995751275PTS system galactitol-specific IIc componentQuickGO ontologyBLASTP
25996342599909276PTS system galactitol-specific IIb componentQuickGO ontologyBLASTP
25999702600428459PTS system galactitol-specific IIa componentQuickGO ontologyBLASTP
260101726039412925putative sigma-54 interacting transcription antiterminatorQuickGO ontologyBLASTP
26040932604743651putative transaldolaseQuickGO ontologyBLASTP
26048072605379573xanthine phosphoribosyltransferaseQuickGO ontologyBLASTP
260576926069201152mannitol-1-phosphate 5-dehydrogenaseQuickGO ontologyBLASTP
26069392607361423PTS system mannitol-specific IIa componentQuickGO ontologyBLASTP
260739126095292139putative transcription antiterminatorQuickGO ontologyBLASTP