Pre_GI Gene

Host: NC_013316:371953 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013316:371953 Clostridium difficile R20291, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
371953372681729putative phosphoserine phosphataseQuickGO ontologyBLASTP
3728063738941089hypothetical proteinBLASTP
374332375180849putative spore coat assembly asparagine-rich proteinQuickGO ontologyBLASTP
375379375744366ArsR-family transcriptional regulatorQuickGO ontologyBLASTP
3757673781542388putative heavy-metal-transporting ATPaseQuickGO ontologyBLASTP
378649380273162516S ribosomal RNAQuickGO ontologyBLASTP
380464383416295323S ribosomal RNAQuickGO ontologyBLASTP
3834893836051175S ribosomal RNAQuickGO ontologyBLASTP
383783384391609hypothetical proteinBLASTP
384413384625213hypothetical proteinBLASTP
384932385705774putative ABC transporter permease proteinQuickGO ontologyBLASTP
385716386453738putative ABC transporter permease proteinQuickGO ontologyBLASTP
386446387435990ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
387526388449924two-component sensor histidine kinaseQuickGO ontologyBLASTP
388451389185735two-component response regulatorQuickGO ontologyBLASTP
389145389333189hypothetical proteinBLASTP
389562390491930hypothetical proteinBLASTP
3905053922771773hypothetical proteinBLASTP
392790393542753putative cobalt transport proteinQuickGO ontologyBLASTP
393532393816285cobalt transport proteinQuickGO ontologyBLASTP
393819394517699cobalt transport proteinQuickGO ontologyBLASTP
394510395328819cobalt ABC transporter ATP-binding proteinQuickGO ontologyBLASTP