Pre_GI Gene

Host: NC_013316:891782 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013316:891782 Clostridium difficile R20291, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
891782892168387hypothetical proteinBLASTP
892347893102756NH3-dependent NAD synthetaseQuickGO ontologyBLASTP
893185893904720hypothetical proteinBLASTP
8940728950761005LacI-family transcriptional regulatorQuickGO ontologyBLASTP
895342896238897putative hydroxymethylglutaryl-CoA lyaseQuickGO ontologyBLASTP
8962838976381356hypothetical proteinBLASTP
8977148989071194putative beta-alanine CoA-transferaseQuickGO ontologyBLASTP
8995159003308163-hydroxybutyryl-CoA dehydratase crotonaseQuickGO ontologyBLASTP
9004249017641341putative permeaseQuickGO ontologyBLASTP
9019019031331233putative CoA-transferaseQuickGO ontologyBLASTP
9031739043151143putative acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
904326905120795electron transfer flavoprotein beta-subunitQuickGO ontologyBLASTP
9051319061531023electron transfer flavoprotein alpha-subunitQuickGO ontologyBLASTP
9062529076281377putative sigma-54-dependent transcriptional regulatorQuickGO ontologyBLASTP
907960908304345hypothetical proteinBLASTP
908473908709237hypothetical proteinBLASTP
9087929098021011hypothetical proteinBLASTP
909896910426531putative flavodoxinQuickGO ontologyBLASTP
9106029125301929putative signaling proteinQuickGO ontologyBLASTP
912705913115411putative universal stress proteinQuickGO ontologyBLASTP
913137913439303putative PTS system IIb componentQuickGO ontologyBLASTP
913655914347693GntR-family transcriptional regulatorQuickGO ontologyBLASTP