Pre_GI Gene

Host: NC_013361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013361:5319497 Escherichia coli O26:H11 str. 11368 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O26:H11 str. 11368 is a human enterohemorrhagic E. coli which attaches to and effaces cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
531949753210141518lysyl-tRNA synthetaseQuickGO ontologyBLASTP
532125153227081458transporterQuickGO ontologyBLASTP
532276753249142148lysine decarboxylase 1QuickGO ontologyBLASTP
532499453263281335lysinecadaverine antiporterQuickGO ontologyBLASTP
532669453282321539DNA-binding transcriptional activator CadCQuickGO ontologyBLASTP
53288935329297405BLASTP
53292555329620366insertion sequence 2 OrfA proteinQuickGO ontologyBLASTP
53297095330287579T3SS effector OspBQuickGO ontologyBLASTP
53304935331311819hypothetical proteinBLASTP
533145853326541197T3SS effector EspGQuickGO ontologyBLASTP
53337935334182390transcriptional regulator LerQuickGO ontologyBLASTP
53341975334415219T3SS componentQuickGO ontologyBLASTP
53344285334742315T3SS componentQuickGO ontologyBLASTP
53347395335338600T3SS componentQuickGO ontologyBLASTP
53352835335978696T3SS componentQuickGO ontologyBLASTP
53359835336636654type III secretion system proteinQuickGO ontologyBLASTP
53366365336905270T3SS structure protein EscSQuickGO ontologyBLASTP
53369055337681777T3SS structure protein EscTQuickGO ontologyBLASTP
533767453387111038secretion system apparatus protein SsaUQuickGO ontologyBLASTP
53387085339166459hypothetical proteinBLASTP
53393635339719357negative regulator GrlRQuickGO ontologyBLASTP
53397945340207414positive regulator GrlAQuickGO ontologyBLASTP
53405935341048456T3SS chaperone CesDQuickGO ontologyBLASTP
534106253426001539T3SS structure protein EscCQuickGO ontologyBLASTP
53426005343055456secretion switching protein SepDQuickGO ontologyBLASTP
53430615343633573T3SS structure protein EscJQuickGO ontologyBLASTP
53436355344063429T3SS componentQuickGO ontologyBLASTP
53440965344398303T3SS effector EspZQuickGO ontologyBLASTP
53445825344935354regulator MpcQuickGO ontologyBLASTP
534493253469592028T3SS structure protein EscVQuickGO ontologyBLASTP
534694353482831341T3SS structure protein EscNQuickGO ontologyBLASTP
53482865348663378T3SS component proteinQuickGO ontologyBLASTP
53486565349072417T3SS component proteinQuickGO ontologyBLASTP
53490355349952918T3SS structure protein SepQQuickGO ontologyBLASTP
53499835350498516T3SS effector EspHQuickGO ontologyBLASTP
53507175351076360T3SS chaperone CesFQuickGO ontologyBLASTP
53513275351938612T3SS effector MapQuickGO ontologyBLASTP
535238553540011617translocated intimin receptor TirQuickGO ontologyBLASTP
53541345354604471T3SS chaperone CesTQuickGO ontologyBLASTP
535466553574842820intiminQuickGO ontologyBLASTP
535769953589191221T3SS structure protein EscDQuickGO ontologyBLASTP
535906253601171056secretion switching protein SepLQuickGO ontologyBLASTP
53601755360753579translocator EspAQuickGO ontologyBLASTP
536076653619081143translocator EspDQuickGO ontologyBLASTP
53619295362873945translocator EspBQuickGO ontologyBLASTP
53628805363287408T3SS chaperone CesD2QuickGO ontologyBLASTP
53633245363545222T3SS structure protein EscFQuickGO ontologyBLASTP
53635515363829279T3SS componentQuickGO ontologyBLASTP
53640455364668624T3SS effector EspFQuickGO ontologyBLASTP
53651595365431273BLASTP
536560353752749672Efa1LifAQuickGO ontologyBLASTP