Pre_GI Gene

Host: NC_013665:1123943 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013665:1123943 Methanocella paludicola SANAE, complete genome

Host Lineage: Methanocella paludicola; Methanocella; Methanocellaceae; Methanocellales; Euryarchaeota; Archaea

General Information: This strain was isolated in Japan from rice paddy samples. Strain SANAE belongs to the Rice Cluster I (RC-I), a 16S rRNA and mcrA gene sequences-defined euryarchaeal lineage within Methanosarcinales and Methanomicrobiales. The RC-I group plays a key role in releasing methane from rice fields, which accounts for 10 to 25% of the global methane emissions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11231461123946801hydroxyethylthiazole kinaseQuickGO ontologyBLASTP
11239431124590648thiamine-phosphate pyrophosphorylaseQuickGO ontologyBLASTP
11246051125483879hypothetical proteinBLASTP
11258961126369474hypothetical proteinBLASTP
112636611276881323putative glycerol-3-phosphate dehydrogenaseQuickGO ontologyBLASTP
11277721128095324putative chromosomal protein MC1QuickGO ontologyBLASTP
11282991128556258hypothetical protein
11285991129357759hypothetical protein
11299781130322345putative truncated transposaseQuickGO ontologyBLASTP
113029411314631170putative transposase for insertion sequence elementQuickGO ontologyBLASTP
11316121131833222putative truncated transposaseQuickGO ontologyBLASTP
11318641132340477putative truncated transposaseQuickGO ontologyBLASTP
113265111340241374hypothetical protein
113419111364222232hypothetical proteinBLASTP
11367641137156393hypothetical proteinBLASTP
11371601137561402glyoxalase family proteinQuickGO ontologyBLASTP
11376261138255630putative phosphohydrolaseQuickGO ontologyBLASTP
11383551139272918hypothetical protein
113959211407341143putative transposase for insertion sequence elementQuickGO ontologyBLASTP
11411101141364255hypothetical protein
114138011423991020hypothetical proteinBLASTP
11426091142968360putative response regulatorQuickGO ontologyBLASTP
11430041143285282hypothetical protein
11435861143969384hypothetical protein
114441711455171101type II DNA topoisomerase VI subunit AQuickGO ontologyBLASTP
114550111471681668type II DNA topoisomerase VI subunit BQuickGO ontologyBLASTP
11472751148009735putative oxidoreductaseQuickGO ontologyBLASTP
11480511148854804putative methyltransferaseQuickGO ontologyBLASTP