Pre_GI Gene

Host: NC_013716:1618249 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:1618249 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
161824916197001452altronate oxidoreductaseQuickGO ontologyBLASTP
16199121620832921hypothetical proteinBLASTP
16208371621598762puative trans-aconitate methyltransferaseQuickGO ontologyBLASTP
162174716229041158putative perosamine synthetaseQuickGO ontologyBLASTP
16230391623281243hypothetical protein
162329616247831488putative sodiumpantothenate symporter pantothenate permeaseQuickGO ontologyBLASTP
16248311625787957putative GntR-family transcriptional regulatorQuickGO ontologyBLASTP
16257921626493702hypothetical proteinBLASTP
162677016278041035hypothetical protein
16278091628066258hypothetical proteinBLASTP
162856216298661305putative DNA-binding proteinQuickGO ontologyBLASTP
16300681630403336hypothetical proteinBLASTP
16305351630843309hypothetical protein
163106716324431377putative lipoproteinQuickGO ontologyBLASTP
16324481633206759MerR-family transcriptional regulatorQuickGO ontologyBLASTP
163333216345521221putative signal transduction proteinQuickGO ontologyBLASTP
16348951635134240hypothetical proteinBLASTP
16351911635493303hypothetical proteinBLASTP
16355271635805279hypothetical proteinBLASTP
16358541636645792hypothetical proteinBLASTP
163664616387212076putative glycogen debranching proteinQuickGO ontologyBLASTP
163872116412942574putative hydrolaseQuickGO ontologyBLASTP
164129116430781788putative hydrolaseQuickGO ontologyBLASTP