Pre_GI Gene

Host: NC_013716:357928 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:357928 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3579283591721245esteraseQuickGO ontologyBLASTP
359230359631402sigma factor-binding protein crl curlin genes transcriptional activatorQuickGO ontologyBLASTP
3596823607341053outer membrane pore protein EQuickGO ontologyBLASTP
3610203621231104glutamate 5-kinaseQuickGO ontologyBLASTP
3621343633841251gamma-glutamyl phosphate reductaseQuickGO ontologyBLASTP
36349836357073tRNA-ThrQuickGO ontology
364176365051876T3SS effector protein EspSQuickGO ontologyBLASTP
3653953666871293T3SS effector protein NleAEspIQuickGO ontologyBLASTP
369350369718369putative exported virulence proteinQuickGO ontology
3701903714101221putative membrane-spanning transport proteinQuickGO ontologyBLASTP
3740383751771140AatP permeaseQuickGO ontologyBLASTP
3751743763821209AatA outer membrane proteinQuickGO ontologyBLASTP
376306377118813AatB putative membrane proteinQuickGO ontologyBLASTP
377111377740630AatC ATP binding protein of ABC transporterQuickGO ontologyBLASTP
3784043797531350putative porinQuickGO ontologyBLASTP
3798683812651398putative MSF transporter proteinQuickGO ontologyBLASTP
3816913827221032LacI-family transcriptional regulatorQuickGO ontologyBLASTP
382975383904930hypothetical proteinBLASTP
383956384216261hypothetical proteinBLASTP
3842893855781290anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
3857073870981392putrescine importerQuickGO ontologyBLASTP
3874093888271419gamma-glutamylputrescine synthetaseQuickGO ontologyBLASTP
389040389804765gamma-glutamyl-gamma-aminobutyrate hydrolaseQuickGO ontologyBLASTP
389831390388558transcriptional regulator of the polyamine metabolism genesQuickGO ontologyBLASTP
3906093920961488gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenaseQuickGO ontologyBLASTP
3920993933791281gamma-glutamylputrescine oxidoreductaseQuickGO ontologyBLASTP
3935643963772814putative adhesin autotransporterQuickGO ontologyBLASTP
396481397071591hypothetical protein
397903398328426hypothetical protein
3983453993911047putative fimbrial adhesinQuickGO ontologyBLASTP
3994124020002589putative fimbrial usher proteinQuickGO ontologyBLASTP
402017402736720putative fimbrial chaperone proteinQuickGO ontologyBLASTP
402955403491537putative major fimbrial subunitQuickGO ontologyBLASTP
403585403848264hypothetical protein
403860404174315hypothetical proteinBLASTP
4043884065202133putative microcin secretionprocessing ATP-binding proteinQuickGO ontologyBLASTP