Pre_GI Gene

Host: NC_013716:4408201 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:4408201 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
440820144095381338ISCro3 transposaseQuickGO ontologyBLASTP
44096924410501810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
44105554411034480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
4411043441232012783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
44123354412472138hypothetical protein
441276944138031035heptosyl-III-transferaseQuickGO ontologyBLASTP
441380044149241125UDP-glucoseheptosyl LPS alpha-13-glucosyltransferaseQuickGO ontologyBLASTP
44149174415714798heptosyl-I-kinaseQuickGO ontologyBLASTP
44157494416684936lipopolysaccharide core biosynthesis protein RfaSQuickGO ontologyBLASTP
441672344178081086lipopolysaccharide 16-galactosyltransferaseQuickGO ontologyBLASTP
441780844188301023UDP-galactoseglucosyl LPS alpha-13-galactosyltransferaseQuickGO ontologyBLASTP
441886644198821017UDP-glucosegalactosyl LPS alpha-12-glucosyltransferaseQuickGO ontologyBLASTP
44198984420596699lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
44206974421506810lipopolysaccharide core biosynthesis protein RfaZQuickGO ontologyBLASTP
442159244227401149lipopolysaccharide 12-N-acetylglucosaminetransferaseQuickGO ontologyBLASTP
442279444240111218lipid A-coreO-antigen ligaseQuickGO ontologyBLASTP
44240474425003957lipopolysaccharide heptosyltransferase 1QuickGO ontologyBLASTP
442500744260531047ADP-heptose-LPS heptosyltransferase IIQuickGO ontologyBLASTP
44261334427113981ADP-L-glycero-D-manno-heptose-6-epimeraseQuickGO ontologyBLASTP
4427328442852411972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
442853444295591026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
442979244308261035putative glycosyl transferaseQuickGO ontologyBLASTP
44308134431625813putative polysaccharide deacetylaseQuickGO ontologyBLASTP
443176444330111248putative peptidaseQuickGO ontologyBLASTP
44330574434601154523-bisphosphoglycerate-independent phosphoglycerate mutaseQuickGO ontologyBLASTP
44348474435278432putative rhodanase-like exported proteinQuickGO ontologyBLASTP