Pre_GI Gene

Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:1119384 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
111938411229533570peptidaseQuickGO ontologyBLASTP
11232671123716450hypothetical proteinBLASTP
11241591124611453hypothetical protein
11247411125739999hypothetical proteinBLASTP
112726111284631203two-component system sensor kinaseQuickGO ontologyBLASTP
11295861129867282hypothetical proteinBLASTP
11303821131299918integrase componentQuickGO ontologyBLASTP
11312961131574279transposaseQuickGO ontologyBLASTP
11316711132168498hypothetical proteinBLASTP
11333061133971666two-component system response regulatorQuickGO ontologyBLASTP
113439511359781584proteinaseQuickGO ontologyBLASTP
113609911380631965hypothetical protein
11390671139573507sigma factorQuickGO ontologyBLASTP
11398801140536657AraC family transcriptional regulatorQuickGO ontologyBLASTP
114054711419201374penicillin binding proteinQuickGO ontologyBLASTP
11420141142781768hypothetical protein
11430301143785756hypothetical protein
1143956114402974tRNA-TrpQuickGO ontology
114437311467332361hypothetical proteinBLASTP
114795511493821428glycosidaseQuickGO ontologyBLASTP
114950611510891584glycosidaseQuickGO ontologyBLASTP
115117911525551377glycosidaseQuickGO ontologyBLASTP
115297111540231053epimerasedehydrataseQuickGO ontologyBLASTP
115407611554911416hypothetical protein
11557271156473747hypothetical protein
11565181157186669zinc-binding alcohol dehydrogenaseQuickGO ontologyBLASTP
115722311587281506hypothetical proteinBLASTP