Pre_GI Gene

Host: NC_013929:2583849 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:2583849 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
258384925853031455major facilitator transporterQuickGO ontologyBLASTP
25853382585931594TetR family transcriptional regulatorQuickGO ontologyBLASTP
258617725876701494AMP-binding synthetaseQuickGO ontologyBLASTP
258784525889961152hypothetical proteinBLASTP
25890872590082996LacI family transcriptional regulatorQuickGO ontologyBLASTP
259024225915671326major facilitator transporterQuickGO ontologyBLASTP
25915852592412828hydrolaseQuickGO ontologyBLASTP
259246525934871023esteraseQuickGO ontologyBLASTP
25936192594044426esteraselipaseQuickGO ontologyBLASTP
25944842595365882LuxR family transcriptional regulatorQuickGO ontologyBLASTP
259546225968171356membrane-anchored peptidaseQuickGO ontologyBLASTP
25971822597703522transposaseQuickGO ontologyBLASTP
25978962598087192hypothetical protein
25986562599642987hypothetical protein
25997942600303510hypothetical protein
260084726022741428arabinofuranosidaseQuickGO ontologyBLASTP
26022842602442159hypothetical protein
260261226037181107glycosyl hydrolaseQuickGO ontologyBLASTP
26040082604427420transposaseQuickGO ontologyBLASTP
260465126058111161regulatorQuickGO ontologyBLASTP
260590826071521245sodiumhydrogen exchange ABC transporterQuickGO ontologyBLASTP