Pre_GI Gene

Host: NC_013929:4136742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:4136742 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
41367424137731990pantothenate kinaseQuickGO ontologyBLASTP
41377604138689930hypothetical proteinBLASTP
413879841402071410phosphoglucosamine mutaseQuickGO ontologyBLASTP
4140391414091852830S ribosomal protein S9QuickGO ontologyBLASTP
4140960414140344450S ribosomal protein L13QuickGO ontologyBLASTP
41417074142588882hypothetical proteinBLASTP
41426144143477864tRNA-pseudouridine synthaseQuickGO ontologyBLASTP
4143627414413350750S ribosomal protein L17QuickGO ontologyBLASTP
414429841453201023DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
4145454414585840530S ribosomal protein S11QuickGO ontologyBLASTP
4145929414630938130S ribosomal protein S13QuickGO ontologyBLASTP
4146520414663311450S ribosomal protein L36QuickGO ontologyBLASTP
41467064146927222translational initiation factor IF1QuickGO ontologyBLASTP
41471244147960837methionyl aminopeptidaseQuickGO ontologyBLASTP
41480734148735663adenylate kinaseQuickGO ontologyBLASTP
414873541500481314preprotein translocase subunit SecYQuickGO ontologyBLASTP
4150292415074745650S ribosomal protein L15QuickGO ontologyBLASTP
4150750415092918050S ribosomal protein L30QuickGO ontologyBLASTP
4150929415153760930S ribosomal protein S5QuickGO ontologyBLASTP
4151577415196038450S ribosomal protein L18QuickGO ontologyBLASTP
4151964415250354050S ribosomal protein L6QuickGO ontologyBLASTP
4152529415292739930S ribosomal protein S8QuickGO ontologyBLASTP
4153142415332718630S ribosomal protein S14QuickGO ontologyBLASTP
4153333415389055850S ribosomal protein L5QuickGO ontologyBLASTP
4153890415421332450S ribosomal protein L24QuickGO ontologyBLASTP
4154216415458436950S ribosomal protein L14QuickGO ontologyBLASTP
4154682415496928830S ribosomal protein S17QuickGO ontologyBLASTP
4154969415519322550S ribosomal protein L29QuickGO ontologyBLASTP
4155193415561242050S ribosomal protein L16QuickGO ontologyBLASTP
4155618415645183430S ribosomal protein S3QuickGO ontologyBLASTP
4156451415679834850S ribosomal protein L22QuickGO ontologyBLASTP
4156842415712328230S ribosomal protein S19QuickGO ontologyBLASTP
4157136415797283750S ribosomal protein L2QuickGO ontologyBLASTP
4158011415843042050S ribosomal protein L23QuickGO ontologyBLASTP
4158430415908966050S ribosomal protein L4QuickGO ontologyBLASTP
4159097415974164550S ribosomal protein L3QuickGO ontologyBLASTP
4159759416006730930S ribosomal protein S10QuickGO ontologyBLASTP
41604774160752276hypothetical protein
41607984161532735hypothetical proteinBLASTP
416162641633021677ATPGTP-binding proteinQuickGO ontologyBLASTP
416330941660862778hypothetical proteinBLASTP