Pre_GI Gene

Host: NC_013929:5135285 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:5135285 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
513528551364091125DNA replication proteinQuickGO ontologyBLASTP
513652051373958766-phosphogluconate dehydrogenaseQuickGO ontologyBLASTP
513759751387271131DNA polymerase III subunit betaQuickGO ontologyBLASTP
513976151417852025chromosomal replication initiator proteinQuickGO ontologyBLASTP
5142204514234113850S ribosomal protein L34QuickGO ontologyBLASTP
51424595142686228hypothetical proteinBLASTP
51427315143084354hypothetical proteinBLASTP
514308851443531266hypothetical proteinBLASTP
51443695144881513nucleic-acid-binding protein JagQuickGO ontologyBLASTP
51449965145712717glucose inhibited division proteinQuickGO ontologyBLASTP
51460815147076996chromosome partitioning proteinQuickGO ontologyBLASTP
51472175148170954chromosome partitioning nucleaseQuickGO ontologyBLASTP
51484955149112618hypothetical proteinBLASTP
51491655149497333thioredoxinQuickGO ontologyBLASTP
51495395150510972thioredoxin reductaseQuickGO ontologyBLASTP
51506835151597915hypothetical proteinBLASTP
51515945152304711sigma factorQuickGO ontologyBLASTP
515233051540961767hypothetical proteinBLASTP
515417651564072232hypothetical proteinBLASTP
515645551588602406hypothetical proteinBLASTP
515909551605431449RNA nucleotidyltransferaseQuickGO ontologyBLASTP
516064151619751335major facilitator transporterQuickGO ontologyBLASTP
5162056516313810831L-myo-inositol-1-phosphate synthaseQuickGO ontologyBLASTP
51631835163863681hypothetical proteinBLASTP
516457051669062337transglycosylaseQuickGO ontologyBLASTP
516709151685991509hypothetical proteinBLASTP
516873951697701032hypothetical proteinBLASTP
516983651709571122hypothetical proteinBLASTP
51711825171496315hypothetical proteinBLASTP
5171758517204829130S ribosomal protein S6QuickGO ontologyBLASTP