Pre_GI Gene

Host: NC_013929:6526745 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:6526745 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
652674565287181974hypothetical proteinBLASTP
652873565301171383hypothetical proteinBLASTP
65301496530454306hypothetical proteinBLASTP
65305176530828312hypothetical proteinBLASTP
65308626531194333hypothetical proteinBLASTP
65315826531815234carbohydrate transporterQuickGO ontologyBLASTP
65318816532780900carbohydrate kinaseQuickGO ontologyBLASTP
65329726533718747carbohydrate-binding proteinQuickGO ontologyBLASTP
6533823653392199hypothetical protein
65339526534515564hypothetical proteinBLASTP
65345286534932405hypothetical proteinBLASTP
65351336535969837DNA-binding proteinQuickGO ontologyBLASTP
65359786536160183hypothetical proteinBLASTP
65362476536432186hypothetical proteinBLASTP
65365826536905324DNA-binding proteinQuickGO ontologyBLASTP
653699465392552262DNA-binding proteinQuickGO ontologyBLASTP
653951465408031290citrate synthaseQuickGO ontologyBLASTP
654159065438782289ATPase PQuickGO ontologyBLASTP
65439226544161240metal-binding proteinQuickGO ontologyBLASTP
65442786544955678TetR family transcriptional regulatorQuickGO ontologyBLASTP
654514365473952253hypothetical proteinBLASTP
654770165487861086alcohol dehydrogenaseQuickGO ontologyBLASTP
65487676549378612acetyltransferaseQuickGO ontologyBLASTP
65494816549759279hypothetical proteinBLASTP
65497566549950195hypothetical protein
65500226550939918hypothetical proteinBLASTP