Pre_GI Gene

Host: NC_014012:3812754 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014012:3812754 Shewanella violacea DSS12, complete genome

Host Lineage: Shewanella violacea; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella violacea DSS12 was isolated from mud, taken at a depth of 5110 m, from the Ryukyu Trench in the Philippine Sea. Shewanella violacea is psychrophilic and barophilic, with an optimum growth temperature and pressure of 8 degrees C and 30 MPa, respectively. This organism is able to grow at pressures from 0.1 MPa to 70Mpa, however, no growth occurs a temperatures above 20 degrees C.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
381275438136028492-dehydro-3-deoxyphosphooctonate aldolaseQuickGO ontologyBLASTP
381427938155081230hypothetical proteinBLASTP
38157613816549789hypothetical proteinBLASTP
38165493816944396hypothetical proteinBLASTP
38169103817149240hypothetical protein
38173263817466141hypothetical protein
38176483818595948hypothetical proteinBLASTP
38186063819274669hypothetical protein
38192923820032741hypothetical protein
38201773820308132hypothetical protein
38203243820533210hypothetical protein
38205783821396819hypothetical protein
38216233822393771hypothetical protein
38223863823288903hypothetical proteinBLASTP
38233253823972648hypothetical protein
382402138254421422HlyD family secretion proteinQuickGO ontologyBLASTP
382543238276722241toxin secretion ABC transporter protein HlyB familyQuickGO ontologyBLASTP
38280103828606597site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
38292563830098843hemK family proteinQuickGO ontologyBLASTP
383015838312431086peptide chain release factor 1QuickGO ontologyBLASTP
383125738325071251glutamyl-tRNA reductaseQuickGO ontologyBLASTP
38327773833439663outer membrane lipoprotein LolBQuickGO ontologyBLASTP
383343638342968614-diphosphocytidyl-2C-methyl-D-erythritol kinaseQuickGO ontologyBLASTP