Pre_GI Gene

Host: NC_014323:816027 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014323:816027 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8160278187082682ClpAB-type chaperone proteinQuickGO ontologyBLASTP
8188208216542835VGR-related type VI secretion system proteinQuickGO ontologyBLASTP
821697822632936hypothetical proteinBLASTP
8226548258663213hypothetical proteinBLASTP
826067826816750hypothetical proteinBLASTP
8270718280721002hypothetical proteinBLASTP
8280868291051020hypothetical proteinBLASTP
829254830219966hypothetical proteinBLASTP
8303448314711128hypothetical proteinBLASTP
831617832432816outer membrane protein and related peptidoglycan-associated lipoproteinsQuickGO ontologyBLASTP
832436833422987hypothetical proteinBLASTP
8334198372943876transmembrane proteinQuickGO ontologyBLASTP
8373258388511527hypothetical proteinBLASTP
838891839148258hypothetical proteinBLASTP
839239840078840transmembrane proteinQuickGO ontologyBLASTP
8403838416961314hypothetical protein