Pre_GI Gene

Host: NC_015177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015177:258504 Pedobacter saltans DSM 12145 chromosome, complete genome

Host Lineage: Pedobacter saltans; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Country: Iceland; Environment: Marine; Isolation: Soil, Iceland; Temp: Mesophile. Strains of the genus Pedobacter are heparinase-producing, obligately aerobic, Gram-negative rods.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2585042611012598ATP-dependent chaperone ClpBQuickGO ontologyBLASTP
261716262111396hypothetical protein
262114262776663orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
262778263389612NUDIX hydrolaseQuickGO ontologyBLASTP
263379263852474pantetheine-phosphate adenylyltransferaseQuickGO ontologyBLASTP
263874264428555methyltransferaseQuickGO ontologyBLASTP
264419265189771hypothetical protein
2653212667121392exonuclease V subunit alphaQuickGO ontologyBLASTP
266846267412567hypothetical protein
267923269439151716S ribosomal RNAQuickGO ontologyBLASTP
26956126963474tRNA-IleQuickGO ontology
26965326972977tRNA-AlaQuickGO ontologyBLASTP
269862272732287123S ribosomal RNAQuickGO ontologyBLASTP
2728012729121125S ribosomal RNAQuickGO ontologyBLASTP
2737512749831233glutamyl-tRNA reductaseQuickGO ontologyBLASTP
2750442766421599porphobilinogen deaminaseQuickGO ontologyBLASTP
276661277632972Porphobilinogen synthaseQuickGO ontologyBLASTP
2776722790421371glutamate-1-semialdehyde 21-aminomutaseQuickGO ontologyBLASTP
279046279909864integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
279925280629705two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
280629281144516hypothetical protein
2811412821751035uroporphyrinogen decarboxylaseQuickGO ontologyBLASTP