Pre_GI Gene

Host: NC_015224:2618192 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015224:2618192 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
261819226208672676bifunctional acetaldehyde-CoAalcohol dehydrogenaseQuickGO ontologyBLASTP
26213672621966600thymidine kinaseQuickGO ontologyBLASTP
26219362622208273hypothetical proteinBLASTP
26227182623128411global DNA-binding transcriptional dual regulator H-NSQuickGO ontologyBLASTP
262351326248621350putative nucleotide sugar dehydrogenaseQuickGO ontologyBLASTP
262518526262011017response regulator of RpoSQuickGO ontologyBLASTP
26263032627205903hypothetical proteinBLASTP
26275872627952366Histone acetyltransferase HPA2 and acetyltransferaseQuickGO ontologyBLASTP
26285792629043465hypothetical proteinBLASTP
26291252629973849formyltetrahydrofolate deformylaseQuickGO ontologyBLASTP
2630146263023085tRNA-TyrQuickGO ontologyBLASTP
2630356263044085tRNA-TyrQuickGO ontologyBLASTP
26307472631607861LysR family transcriptional regulatorQuickGO ontologyBLASTP
26323832633189807exonuclease IIIQuickGO ontologyBLASTP
26332732633659387pyrimidine deoxynucleoside triphosphate pyrophosphohydrolaseQuickGO ontologyBLASTP
26336642633954291hypothetical proteinBLASTP
263395126358761926DNA topoisomerase IIIQuickGO ontologyBLASTP
263592326369691047selenophosphate synthetaseQuickGO ontologyBLASTP