Pre_GI Gene

Host: NC_015275:3407358 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:3407358 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34067303407371642Thiamine-phosphate pyrophosphorylaseQuickGO ontologyBLASTP
34073583408182825Hydroxyethylthiazole kinaseQuickGO ontologyBLASTP
340847534103251851Beta propeller domain-containing proteinQuickGO ontologyBLASTP
341072934120601332beta-galactosidaseQuickGO ontologyBLASTP
34121613412946786transcriptional regulator AraC familyQuickGO ontologyBLASTP
34131963413546351hypothetical proteinBLASTP
34136613414134474hypothetical protein
341431534191024788S-layer domain-containing proteinQuickGO ontologyBLASTP
34192543419910657hypothetical protein
342009834247774680cell wallsurface repeat proteinQuickGO ontologyBLASTP
34247743425160387hypothetical proteinBLASTP
34251573425537381hypothetical proteinBLASTP
34257503426475726two component transcriptional regulator LytTR familyQuickGO ontologyBLASTP
342647234287332262LPXTG-motif cell wall anchor domain proteinQuickGO ontologyBLASTP
342872634306601935ATP-binding region ATPase domain proteinQuickGO ontologyBLASTP
34314143431743330putative mobilization proteinQuickGO ontologyBLASTP
343172134328541134Relaxasemobilization nuclease family proteinQuickGO ontologyBLASTP
34328443433077234hypothetical protein
343317234347761605RecombinaseQuickGO ontologyBLASTP
343488034369792100V-type H-translocating pyrophosphataseQuickGO ontologyBLASTP
34373003437677378hypothetical proteinBLASTP
343774734389431197cytochrome c biogenesis protein transmembrane regionQuickGO ontologyBLASTP
34390573439386330transcriptional regulator HxlR familyQuickGO ontologyBLASTP
34394983439899402thioesterase superfamily proteinQuickGO ontologyBLASTP
34400593440643585hypothetical protein
344079934420281230peptidase TQuickGO ontologyBLASTP
34420773442559483transcriptional regulator CarD familyQuickGO ontologyBLASTP
344414634464312286UvrDREP helicaseQuickGO ontologyBLASTP