Pre_GI Gene

Host: NC_015275:3846260 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:3846260 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38462603847225966DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
38472773847903627ribosomal protein S4QuickGO ontologyBLASTP
3847917384832440830S ribosomal protein S11QuickGO ontologyBLASTP
3848349384872037230S ribosomal protein S13QuickGO ontologyBLASTP
38488723848985114ribosomal protein L36QuickGO ontology
38490133849231219Translation initiation factor IF-1QuickGO ontologyBLASTP
38492473849525279hypothetical proteinBLASTP
38495373850289753methionine aminopeptidase type IQuickGO ontologyBLASTP
38502913850938648Adenylate kinaseQuickGO ontologyBLASTP
385096138522291269preprotein translocase SecY subunitQuickGO ontologyBLASTP
38522323852675444ribosomal protein L15QuickGO ontologyBLASTP
38527103852895186ribosomal protein L30QuickGO ontologyBLASTP
38529123853424513ribosomal protein S5QuickGO ontologyBLASTP
38534453853813369ribosomal protein L18QuickGO ontologyBLASTP
38538363854375540ribosomal protein L6QuickGO ontologyBLASTP
38544063854807402ribosomal protein S8QuickGO ontologyBLASTP
38548303855015186ribosomal protein S14QuickGO ontologyBLASTP
38550293855568540ribosomal protein L5QuickGO ontologyBLASTP
38555943855905312ribosomal protein L24QuickGO ontologyBLASTP
38559193856287369ribosomal protein L14QuickGO ontologyBLASTP
3856319385657625830S ribosomal protein S17QuickGO ontologyBLASTP
38565953856798204ribosomal protein L29QuickGO ontologyBLASTP
38567883857228441ribosomal protein L16QuickGO ontologyBLASTP
38572283857887660ribosomal protein S3QuickGO ontologyBLASTP
38579003858286387ribosomal protein L22QuickGO ontologyBLASTP
38583183858599282ribosomal protein S19QuickGO ontologyBLASTP
38586313859464834ribosomal protein L2QuickGO ontologyBLASTP
38595423859841300Ribosomal protein L25L23QuickGO ontologyBLASTP
38598413860464624ribosomal protein L4L1eQuickGO ontologyBLASTP
3860492386112163050S ribosomal protein L3QuickGO ontologyBLASTP
38612183861526309ribosomal protein S10QuickGO ontologyBLASTP
386219138633841194translation elongation factor TuQuickGO ontologyBLASTP
386350638655932088translation elongation factor GQuickGO ontologyBLASTP
38656213866091471ribosomal protein S7QuickGO ontologyBLASTP
38662343866653420ribosomal protein S12QuickGO ontologyBLASTP
38666693866911243ribosomal protein L7AeL30eS12eGadd45QuickGO ontologyBLASTP
38673173867508192hypothetical protein
38676943868395702protein of unknown function DUF218QuickGO ontologyBLASTP
386861738722463630DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP