Pre_GI Gene

Host: NC_015379:2417312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:2417312 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2417312241838210713-deoxy-7-phosphoheptulonate synthase phospho-2-dehydro-3-deoxyheptonate aldolaseQuickGO ontologyBLASTP
24189992419760762putative hydrolaseQuickGO ontologyBLASTP
24197682420202435putative acetyltransferaseQuickGO ontologyBLASTP
24203292420970642Response regulator NarL familyQuickGO ontologyBLASTP
242097324227961824uvrABC system protein CQuickGO ontologyBLASTP
24229192423389471CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseQuickGO ontologyBLASTP
2423453242352876tRNA-GlyQuickGO ontology
24236272424586960Hypothetical proteinQuickGO ontologyBLASTP
24247672425012246hypothetical protein
24250452425368324hypothetical proteinBLASTP
242586524274511587hypothetical protein
24276582428524867nucleaseQuickGO ontologyBLASTP
24285912428863273hypothetical protein
242911424309311818hypothetical proteinBLASTP
243150924330141506hypothetical proteinBLASTP
24330112433364354hypothetical proteinBLASTP
243336124347701410Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
24347672435720954Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
24360202436790771hypothetical proteinBLASTP
24369722437463492putative DNA repair proteinQuickGO ontologyBLASTP
24380002438635636Hypothetical proteinQuickGO ontologyBLASTP
24388522439376525Hypothetical protein putative membrane proteinQuickGO ontology
243977024426072838hypothetical proteinBLASTP
24426072443032426conserved hypothetical protein putative lipoproteinQuickGO ontologyBLASTP
244301024444461437Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
24444362445323888Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
24453202446003684hypothetical proteinBLASTP
24460002446395396hypothetical proteinBLASTP
24464082446767360hypothetical proteinBLASTP
24467882447021234hypothetical proteinBLASTP
24470182447356339Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
24474922447956465hypothetical proteinBLASTP
24480342448783750hypothetical proteinBLASTP
244878024509092130hypothetical proteinBLASTP
24509122451340429Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
24514992452218720Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
24522002452871672hypothetical proteinBLASTP
24528682453395528Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
24535622453864303hypothetical proteinBLASTP
24539942454479486hypothetical proteinBLASTP
24546132455020408hypothetical proteinBLASTP
245586024578752016DNA topoisomerase DNA topoisomerase IIIQuickGO ontologyBLASTP
24581702458565396putative single-strand binding proteinQuickGO ontologyBLASTP
24585622459077516hypothetical proteinBLASTP
24590772459862786hypothetical proteinBLASTP
246002124611661146hypothetical proteinBLASTP
24611712461731561hypothetical proteinBLASTP
246174324632931551hypothetical proteinBLASTP
24634852463706222putative transcription factor AlpA familyQuickGO ontologyBLASTP
24638152464519705hypothetical proteinBLASTP