Pre_GI Gene

Host: NC_015379:89441 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:89441 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8944190400960Methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
90397917071311Ribosomal RNA small subunit methyltransferase BQuickGO ontologyBLASTP
91732931051374Trk system potassium uptake proteinQuickGO ontologyBLASTP
9324693557312hypothetical proteinBLASTP
9383894263426Hypothetical proteinQuickGO ontologyBLASTP
9440694714309Hypothetical proteinQuickGO ontologyBLASTP
9488995323435Hypothetical proteinQuickGO ontology
9590396385483Hypothetical proteinQuickGO ontology
9645797152696hypothetical protein
9761397996384hypothetical protein
983751003151941Hypothetical proteinQuickGO ontologyBLASTP
100341100508168Hypothetical proteinQuickGO ontologyBLASTP
100724100999276hypothetical proteinBLASTP
101781102086306Hypothetical proteinQuickGO ontologyBLASTP
1021301035361407hypothetical proteinBLASTP
1035301046931164hypothetical proteinBLASTP
1051541062931140Hypothetical protein putative membrane proteinQuickGO ontology
106671106865195hypothetical proteinBLASTP
108218108853636Putative copper-binding proteinQuickGO ontologyBLASTP
108850109749900Putative protoheme IX farnesyltransferaseQuickGO ontologyBLASTP
1097371108161080hypothetical proteinBLASTP
110827111420594hypothetical proteinBLASTP
111386112123738hypothetical proteinBLASTP
112194112397204hypothetical proteinBLASTP
112405113292888Putative cytochrome-c oxidase subunit IIIQuickGO ontologyBLASTP
113317113868552Putative cytochrome-c oxidase assembly proteinQuickGO ontologyBLASTP
1139901155821593Putative cytochrome-c oxidase subunit IQuickGO ontologyBLASTP
1156651167921128Putative cytochrome-c oxidase subunit IIQuickGO ontologyBLASTP
117166117816651hypothetical protein