Pre_GI Gene

Host: NC_015410:3093465 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015410:3093465 Pseudomonas mendocina NK-01 chromosome, complete genome

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30934653093845381hypothetical proteinBLASTP
30943273094722396hypothetical proteinBLASTP
30947193095507789OmpAMotB domain-containing proteinQuickGO ontologyBLASTP
309555330967791227response regulator receiver modulated PASPAC sensor-containing diguanylate cyclaseQuickGO ontologyBLASTP
30968013097517717cyclic nucleotide-binding domain-containing proteinQuickGO ontologyBLASTP
30976373098365729CrpFnr family transcriptional regulatorQuickGO ontologyBLASTP
310137431026751302NaH antiporter NhaAQuickGO ontologyBLASTP
31030583103255198hypothetical proteinBLASTP
31044263104992567alphabeta family hydrolaseQuickGO ontologyBLASTP
31055143105927414RadC-like proteinQuickGO ontologyBLASTP
31059743106168195ISPsy6 transposaseQuickGO ontologyBLASTP
310627531076541380IS4 family transposaseQuickGO ontologyBLASTP
310784531105112667hypothetical proteinBLASTP
31106643111347684MltA-interacting proteinQuickGO ontologyBLASTP
311177231131931422isopropylmalate isomerase large subunitQuickGO ontologyBLASTP
311319531138036093-isopropylmalate dehydratase small subunit LeuD2QuickGO ontologyBLASTP
31139083114726819LysR family transcriptional regulatorQuickGO ontologyBLASTP
31149033115886984alphabeta hydrolase domain-containing proteinQuickGO ontologyBLASTP
31161583116466309hypothetical proteinBLASTP
311645931178741416hypothetical proteinBLASTP
31179023118825924D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding proteinQuickGO ontologyBLASTP
311895631203531398hypothetical proteinBLASTP
312044331217141272Mgcitrate complex transporterQuickGO ontologyBLASTP
312190731230941188DNA binding domain-containing proteinQuickGO ontologyBLASTP
312338931246631275putative secretory lipaseQuickGO ontologyBLASTP
312465631257621107membrane protein AbrB duplicationQuickGO ontologyBLASTP
31258723126579708short chain dehydrogenaseQuickGO ontologyBLASTP
31276683128048381DNA repair protein RadCQuickGO ontologyBLASTP
31291013129430330hypothetical protein
31299723130241270hypothetical proteinBLASTP
31321713132428258hypothetical protein
31324953132713219TatD-related deoxyribonucleaseQuickGO ontologyBLASTP
313328931346561368hypothetical proteinBLASTP
31346533135204552hypothetical proteinBLASTP
313554331375071965kap P-loop domain-containing proteinQuickGO ontologyBLASTP
313818231397231542hypothetical proteinBLASTP
31402093140715507DNA repair protein RadCQuickGO ontologyBLASTP
31407513141470720hypothetical proteinBLASTP
31418453142228384putative enzyme proteinQuickGO ontologyBLASTP
314229931434111113class III alcohol dehydrogenaseQuickGO ontologyBLASTP
314348031449191440amino acid permease-associated proteinQuickGO ontologyBLASTP
31457793146048270two component LuxR family transcriptional regulatorQuickGO ontologyBLASTP
31462283146794567phosphoglycerate mutaseQuickGO ontologyBLASTP
31470553147999945choline kinase involved in LPS biosynthesis-like proteinQuickGO ontologyBLASTP
314799631491351140N-methyltryptophan oxidaseQuickGO ontologyBLASTP
314978531510261242aminotransferaseQuickGO ontologyBLASTP
31515963151787192hypothetical proteinBLASTP
315253031538431314hypothetical proteinBLASTP
31546053155408804DNA-binding transcriptional activator FeaRQuickGO ontologyBLASTP
315557531570261452amine oxidaseQuickGO ontologyBLASTP