Pre_GI Gene

Host: NC_015425:2528549 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015425:2528549 Clostridium botulinum BKT015925 chromosome, complete genome

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
252854925301351587site-specific recombinase resolvase familyQuickGO ontologyBLASTP
25301402530298159hypothetical protein
25303582530660303hypothetical proteinBLASTP
25306812531259579nitroreductase family proteinQuickGO ontologyBLASTP
25313452532106762putative resolvase family site-specific recombinaseQuickGO ontologyBLASTP
25321822533135954D-isomer specific 2-hydroxyacid dehydrogenaseQuickGO ontologyBLASTP
25332382533360123hypothetical protein
25334092533675267mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
253381025350031194acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
253504325358888463-hydroxybutyryl-CoA dehydrogenaseQuickGO ontologyBLASTP
253626925378191551glycerol kinaseQuickGO ontologyBLASTP
25378262538536711glycerol uptake facilitator proteinQuickGO ontologyBLASTP
253876025406521893methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
254073425422601527glycerol kinaseQuickGO ontologyBLASTP
25424242543140717glycerol uptake facilitator proteinQuickGO ontologyBLASTP
25434442543815372hypothetical proteinBLASTP
254382225450811260pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
254512925465621434FAD-dependent oxidoreductaseQuickGO ontologyBLASTP
25467652547331567glycerol uptake operon antiterminator regulatory proteinQuickGO ontologyBLASTP
25475882547950363hypothetical proteinBLASTP
254825525494841230Xaa-pro aminopeptidaseQuickGO ontologyBLASTP
25496462550353708putative 2-phosphosulfolactate phosphataseQuickGO ontologyBLASTP
25504242550624201major cold shock proteinQuickGO ontologyBLASTP
25511992551366168hypothetical proteinBLASTP
25514862551635150hypothetical protein
25520572552581525shikimate kinaseQuickGO ontologyBLASTP
25525972553409813shikimate 5-dehydrogenaseQuickGO ontologyBLASTP
25534222553712291chorismate mutaseQuickGO ontologyBLASTP
255371425547811068Chorismate synthaseQuickGO ontologyBLASTP
2554759255606613083-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
2556081255714210623-dehydroquinate synthaseQuickGO ontologyBLASTP
25571422557993852prephenate dehydrogenaseQuickGO ontologyBLASTP
255802125590221002phospho-2-dehydro-3-deoxyheptonate aldolaseQuickGO ontologyBLASTP
25591512559306156hypothetical protein
25595462559911366hypothetical protein
256000025615861587putative glycine betainecarnitinecholine ABC transporterQuickGO ontologyBLASTP
256158625627221137glycine betainecarnitinecholine transport ATP-binding proteinQuickGO ontologyBLASTP
256290825642061299lipaseQuickGO ontologyBLASTP
25647092565647939putative CoA-substrate-specific enzyme activaseQuickGO ontologyBLASTP
256563725667131077hypothetical proteinBLASTP
25667062567560855hypothetical proteinBLASTP
256777925692361458RNA-directed DNA polymeraseQuickGO ontologyBLASTP
25696862570534849transporterQuickGO ontologyBLASTP
25706822571233552iron-sulfur cluster-binding proteinQuickGO ontologyBLASTP
25716062572241636hypothetical proteinBLASTP
25722682572639372DNA helicaseQuickGO ontologyBLASTP
257293825766063669DNA helicaseQuickGO ontologyBLASTP