Pre_GI Gene

Host: NC_015703:2281479 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015703:2281479 Runella slithyformis DSM 19594 chromosome, complete genome

Host Lineage: Runella slithyformis; Runella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Environment: Fresh water, Host; Isolation: Fresh water lake; USA, Louisiana, Baton; Temp: Psychrophile. This is a species of curved, nonflexible, pink bacteria. The species is of interest because it is able to grow at temperatures as low as 4°C. The species epithet is derived from slithy, a nonsense word from Lewis Carroll's Jabberwocky for a fictional organism that is 'slithy' and the Latin word 'suffix' meaning '-like, in the shape of', yielding the Neo-Latin word 'slithyformis' meaning 'slithy in form'.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22814792282195717alphabeta hydrolase fold proteinQuickGO ontologyBLASTP
228228422835221239Sigma 54 interacting domain-containing proteinQuickGO ontologyBLASTP
22838352284530696hypothetical proteinBLASTP
228454322858291287hypothetical proteinBLASTP
228583222881322301Xenobiotic-transporting ATPaseQuickGO ontologyBLASTP
22881292288740612hypothetical proteinBLASTP
22890762289462387hypothetical proteinBLASTP
22896392290591953
22905912290860270hypothetical protein
22909982291471474hypothetical protein
22915552291755201hypothetical protein
2291787229187993hypothetical protein
22921372292604468helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
22928012293403603Superoxide dismutaseQuickGO ontologyBLASTP
22934602293924465CMPdCMP deaminase zinc-binding proteinQuickGO ontologyBLASTP
22942232294462240phosphopantetheine-binding proteinQuickGO ontologyBLASTP
22944672294595129hypothetical protein
22946502296677202814-alpha-glucan branching proteinQuickGO ontologyBLASTP
22968022297476675nicotinamide mononucleotide transporter PnuCQuickGO ontologyBLASTP
22975192297698180
229769522988461152peptidase M28QuickGO ontologyBLASTP
22988612299607747hypothetical protein
22997512300164414hypothetical proteinBLASTP
230021123012511041thiamine-monophosphate kinaseQuickGO ontologyBLASTP
23014452302098654peptide methionine sulfoxide reductase msrAQuickGO ontologyBLASTP
23023072302576270hypothetical protein
23025942303334741hypothetical protein
23035692304234666phosphonate-transporting ATPaseQuickGO ontologyBLASTP