Pre_GI Gene

Host: NC_015761:1181186 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015761:1181186 Salmonella bongori NCTC 12419, complete genome

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11811861181827642hypothetical proteinBLASTP
118186311829691107tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferaseQuickGO ontologyBLASTP
11830231183484462mutT family proteinQuickGO ontologyBLASTP
11834941184147654ribosomal large subunit pseudouridine synthase BQuickGO ontologyBLASTP
118431911855691251isocitrate dehydrogenaseQuickGO ontologyBLASTP
118660111882321632beta-lactamaseQuickGO ontologyBLASTP
118897111914122442leucine rich repeat virulence proteinQuickGO ontologyBLASTP
11919891192396408pertussis-like toxin subunitQuickGO ontologyBLASTP
11924131193144732pertussis-like toxin subunitQuickGO ontologyBLASTP
11933371193879543hypothetical proteinBLASTP
11940381194415378hypothetical proteinBLASTP
11945731195391819toxinQuickGO ontologyBLASTP
119613511999053771hypothetical proteinBLASTP
120039012045444155hemoglobin proteaseQuickGO ontologyBLASTP
12046291204868240virulence proteinQuickGO ontologyBLASTP
12050721205593522lipoproteinQuickGO ontologyBLASTP
120611012087912682leucine rich-repeat virulence proteinQuickGO ontologyBLASTP
12092231209435213cold shock proteinQuickGO ontologyBLASTP
12096481209911264virulence proteinQuickGO ontologyBLASTP
12106071211164558outer membrane invasion proteinQuickGO ontologyBLASTP
12123541212695342hypothetical proteinBLASTP
12130801213205126lipoproteinQuickGO ontologyBLASTP
12138091214279471heat shock proteinQuickGO ontologyBLASTP
12147831215313531cytochromeQuickGO ontologyBLASTP
12154581215772315lipoproteinQuickGO ontologyBLASTP
121630112180311731substrate-binding transport proteinQuickGO ontologyBLASTP
12180311219005975inner membrane transport proteinQuickGO ontologyBLASTP
12189951219807813inner membrane transport proteinQuickGO ontologyBLASTP
12198011220598798ABC transport ATP-binding proteinQuickGO ontologyBLASTP
12205921221194603ABC transport ATP-binding subunitQuickGO ontologyBLASTP
122127112224041134hypothetical proteinBLASTP
12225951222921327hypothetical proteinBLASTP
12231451223795651hypothetical proteinBLASTP
12239161224704789aminoglycoside-resistance proteinQuickGO ontologyBLASTP
12248461225439594regulatory proteinQuickGO ontologyBLASTP
12255071226355849transcriptional regulatorQuickGO ontologyBLASTP
12264071226655249hypothetical proteinBLASTP
12269691227514546chorismate mutaseQuickGO ontologyBLASTP
12275391228321783histidine-binding periplasmic proteinQuickGO ontologyBLASTP