Pre_GI Gene

Host: NC_015761:3611993 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015761:3611993 Salmonella bongori NCTC 12419, complete genome

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
361199336130181026threonine 3-dehydrogenaseQuickGO ontologyBLASTP
3613028361422411972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
36144273615359933ADP-L-Glycero-D-mannoheptose-6-epimeraseQuickGO ontologyBLASTP
361536236164081047ADP-heptose-LPS heptosyltransferase IIQuickGO ontologyBLASTP
36164083617361954lipopolysaccharide heptosyltransferase-1QuickGO ontologyBLASTP
361740136186181218O-antigen ligaseQuickGO ontologyBLASTP
361868036198251146lipopolysaccharide 12-N-acetylglucosaminetransferaseQuickGO ontologyBLASTP
36199083620717810lipopolysaccharide core biosynthesis protein RfaZQuickGO ontologyBLASTP
36208673621565699lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
362158636225961011lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
362261436236271014lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
362363936247121074lipopolysaccharide 16-galactosyltransferaseQuickGO ontologyBLASTP
362479636257379422-glucosyltransferaseQuickGO ontologyBLASTP
36257743626571798lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
362657336276881116lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
362768536287191035lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
3629165363044212783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
36304513630930480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
36309713631780810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
3631878363204516850S ribosomal subunit protein L33QuickGO ontologyBLASTP
36325193633184666DNA repair proteinQuickGO ontologyBLASTP
363321636345801365hypothetical proteinBLASTP
36345613635016456deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
36351253635721597TetR family transcriptional regulatorQuickGO ontologyBLASTP
36358133636454642orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
36365333637249717RNase PHQuickGO ontologyBLASTP