Pre_GI Gene

Host: NC_015957:5310000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:5310000 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
531013753117081572cytosinepurines uracil thiamine allantoin permeaseQuickGO ontologyBLASTP
531176753145592793hypothetical proteinBLASTP
53145665314817252RbsD or FucU transportQuickGO ontologyBLASTP
531490253170342133glycoside hydrolase family proteinQuickGO ontologyBLASTP
53173635318016654LuxR family two component transcriptional regulatorQuickGO ontologyBLASTP
531801353192151203putative signal transduction histidine kinaseQuickGO ontologyBLASTP
53193385320300963short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
532060153216411041hypothetical proteinBLASTP
53217305322203474aromatic-ring-hydroxylating dioxygenase beta subunitQuickGO ontologyBLASTP
53223395323112774hypothetical proteinBLASTP
53231435323991849hypothetical proteinBLASTP
53241505325049900LysR family transcriptional regulatorQuickGO ontologyBLASTP
53252365325403168
532569053273091620amidohydrolase 3QuickGO ontologyBLASTP
53276335328499867hypothetical proteinBLASTP
53286465329404759IclR family transcriptional regulatorQuickGO ontologyBLASTP
53297905330368579Glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
53303655331348984fumarylacetoacetate FAA hydrolaseQuickGO ontologyBLASTP
533134853324301083dipeptidyl aminopeptidaseacylaminoacyl-peptidase-like proteinQuickGO ontologyBLASTP