Pre_GI Gene

Host: NC_016445:2012294 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016445:2012294 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
201229420137061413glutamate synthase subunit betaQuickGO ontologyBLASTP
20139622014327366hypothetical proteinBLASTP
201441520151106965-methylthioadenosineS-adenosylhomocysteine nucleosidaseQuickGO ontologyBLASTP
20151232016076954adenosylcobinamide-phosphate synthase CobDQuickGO ontologyBLASTP
20160772016907831vitamin B12 transport system substrate-binding proteinQuickGO ontologyBLASTP
20169902017610621hypothetical proteinBLASTP
20177622018622861LysR family transcriptional regulatorQuickGO ontologyBLASTP
20185522019337786hypothetical proteinBLASTP
20197992020770972RNA-directed DNA polymeraseQuickGO ontologyBLASTP
202077120223931623hypothetical proteinBLASTP
20224062023023618hypothetical proteinBLASTP
20231282023274147hypothetical proteinBLASTP
20234912024114624hypothetical proteinBLASTP
202420420274343231carbamoyl phosphate synthase large subunitQuickGO ontologyBLASTP
202745120285901140carbamoyl phosphate synthase small subunitQuickGO ontologyBLASTP
20288572028985129hypothetical proteinBLASTP
20290722029881810dihydrodipicolinate reductaseQuickGO ontologyBLASTP
20299962030394399mutator MutT proteinQuickGO ontologyBLASTP
20303802030547168hypothetical proteinBLASTP
203054420332552712preprotein translocase subunit SecAQuickGO ontologyBLASTP
20336092034082474hypothetical proteinBLASTP
20341872035104918UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP