Pre_GI Gene

Host: NC_016445:2938887 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016445:2938887 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
293888729402991413pyruvate kinaseQuickGO ontologyBLASTP
29407272941497771DeoR family transcriptional regulatorQuickGO ontologyBLASTP
294156029433921833glucosamine--fructose-6-phosphate aminotransferaseQuickGO ontologyBLASTP
294345329445321080putative extracellular solute-binding proteinQuickGO ontologyBLASTP
294478929465491761hypothetical proteinBLASTP
294731129492721962hypothetical proteinBLASTP
294977829509441167hypothetical proteinBLASTP
29512002952075876hypothetical proteinBLASTP
29532922954164873transposase OrfAB subunit BQuickGO ontologyBLASTP
29541612954469309transposase OrfAB subunit AQuickGO ontologyBLASTP
29554162956213798transcriptional regulator AraCXylS familyQuickGO ontologyBLASTP
295621029580901881methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
295819429594261233hypothetical proteinBLASTP
295981629610571242phage integraseQuickGO ontologyBLASTP
2961223296129876tRNA-MetQuickGO ontologyBLASTP
296144329633201878RNA polymerase primary sigma factorQuickGO ontologyBLASTP
296341929652481830DNA primaseQuickGO ontologyBLASTP
29652722965715444hypothetical proteinBLASTP
2965745296596021630S ribosomal protein S21QuickGO ontologyBLASTP
29659882966158171hypothetical protein
296620129672201020putative DNA-bindingiron metalloproteinAP endonucleaseQuickGO ontologyBLASTP
29673742968186813hypothetical proteinBLASTP
29682352968861627glycerol-3-phosphate acyltransferase PlsYQuickGO ontologyBLASTP
29690502969403354dihydroneopterin aldolaseQuickGO ontologyBLASTP
296940029699065072-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP
29699032970706804undecaprenyl pyrophosphate phosphataseQuickGO ontologyBLASTP
29708212971105285cell division protein FtsBQuickGO ontologyBLASTP
297110229718006992-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
297179729722734772-C-methyl-D-erythritol 24-cyclodiphosphate synthaseQuickGO ontologyBLASTP
297230329733881086tRNA pseudouridine synthase DQuickGO ontologyBLASTP
29733512974142792stationary phase survival protein SurEQuickGO ontologyBLASTP
29741352974761627protein-L-isoaspartate O-methyltransferaseQuickGO ontologyBLASTP
29747612975696936lipoprotein NlpDQuickGO ontologyBLASTP