Pre_GI Gene

Host: NC_016510 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016510:2426150 Flavobacterium columnare ATCC 49512 chromosome, complete genome

Host Lineage: Flavobacterium columnare; Flavobacterium; Flavobacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Isolated in 1987 from a skin lesion of a brown trout fry in France. Fish pathogen. Purified genomic DNA obtained from ATCC 49512 F. columnare is considered ubiquitous in the warmwater aquatic environment, and it is the causative agent of columnaris disease in fish. Columnaris disease is common throughout the world and infects most species of freshwater fish, including aquaculture species, wild fish populations, and ornamental fish.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
242615024333347185SprA proteinQuickGO ontologyBLASTP
24334022433782381glycine cleavage system protein HQuickGO ontologyBLASTP
24337722434134363hypothetical protein
24341972434940744deoxyribose-phosphate aldolaseQuickGO ontologyBLASTP
243495324370432091hypothetical proteinBLASTP
243725924392141956OmpA family outer membrane proteinQuickGO ontologyBLASTP
24392252440139915hypothetical proteinBLASTP
244019424476157422hypothetical proteinBLASTP
244841324502511839hypothetical proteinBLASTP
24507842451395612DNA-binding response regulator LuxR family proteinQuickGO ontologyBLASTP
245139524530141620PASPAC domain proteinQuickGO ontologyBLASTP
245321324548021590peptide chain release factor 3QuickGO ontologyBLASTP
24553062455620315hypothetical proteinBLASTP
24558442456116273hypothetical protein
245618924605534365DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
246057024643823813DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
2464643246500836650S ribosomal protein L7L12QuickGO ontologyBLASTP
2465066246556950450S ribosomal protein L10QuickGO ontologyBLASTP
2465595246628469050S ribosomal protein L1QuickGO ontologyBLASTP
2466291246673144150S ribosomal protein L11QuickGO ontologyBLASTP
24667952467346552putative transcription antitermination proteinQuickGO ontologyBLASTP
24673562467595240preprotein translocase SecE subunitQuickGO ontologyBLASTP
246769424688811188elongation factor TuQuickGO ontologyBLASTP
2469083246916684tRNA-TyrQuickGO ontology
24694082469710303hypothetical proteinBLASTP
24697482470641894integraserecombinase XerCQuickGO ontologyBLASTP
2470731247092519530S ribosomal protein S21QuickGO ontologyBLASTP
247123924725791341amine oxidaseQuickGO ontologyBLASTP
247288824740571170acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
24740832474889807hypothetical proteinBLASTP