Pre_GI Gene

Host: NC_016510 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016510:2991687 Flavobacterium columnare ATCC 49512 chromosome, complete genome

Host Lineage: Flavobacterium columnare; Flavobacterium; Flavobacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Isolated in 1987 from a skin lesion of a brown trout fry in France. Fish pathogen. Purified genomic DNA obtained from ATCC 49512 F. columnare is considered ubiquitous in the warmwater aquatic environment, and it is the causative agent of columnaris disease in fish. Columnaris disease is common throughout the world and infects most species of freshwater fish, including aquaculture species, wild fish populations, and ornamental fish.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
299168729938822196ATP-dependent DNA helicase RecQ1QuickGO ontologyBLASTP
29942672994551285hypothetical protein
29945602994910351hypothetical proteinBLASTP
29949302995289360transposase mutator typeQuickGO ontologyBLASTP
29953082995487180transposase IS3IS911 family proteinQuickGO ontologyBLASTP
29955742996488915putative IS3 family transposaseQuickGO ontologyBLASTP
29964962996831336hypothetical proteinBLASTP
29971322997503372hypothetical protein
299756329988461284RHS repeat-associated core domain proteinQuickGO ontologyBLASTP
29988532999221369Rhs element Vgr proteinQuickGO ontologyBLASTP
29992482999523276Rhs element Vgr proteinQuickGO ontologyBLASTP
299979930008781080hypothetical proteinBLASTP
300087130024901620hypothetical proteinBLASTP
300249330044121920Rhs element Vgr proteinQuickGO ontologyBLASTP
30044443004902459hypothetical proteinBLASTP
30050593005445387hypothetical proteinBLASTP
3006202300737411733-oxoacyl-acyl-carrier-protein synthaseQuickGO ontologyBLASTP
30073633007827465hypothetical proteinBLASTP
300807730109142838TonB-dependent outer membrane receptorprecursorQuickGO ontologyBLASTP
301089630125451650putative lipoproteinQuickGO ontologyBLASTP
301273430142451512F0F1 ATP synthase subunit betaQuickGO ontologyBLASTP