Pre_GI Gene

Host: NC_016582:1 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016582:1 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
691801111hypothetical protein
13021655354hypothetical protein
16722526855hypothetical proteinBLASTP
28122964153hypothetical protein
305046151566hypothetical protein
72277409183hypothetical protein
74198045627hypothetical protein
80578422366hypothetical protein
85278673147hypothetical protein
86578944288hypothetical protein
90209520501hypothetical protein
97849888105hypothetical proteinBLASTP
1212612479354hypothetical protein
1266513492828D-aminopeptidaseQuickGO ontologyBLASTP
1403514238204hypothetical proteinBLASTP
1433214853522transposaseQuickGO ontologyBLASTP
1485015002153hypothetical protein
1497215466495hypothetical proteinBLASTP
15555183622808DEADDEAH box helicaseQuickGO ontologyBLASTP
1866018824165hypothetical protein
1892919402474hypothetical proteinBLASTP