Pre_GI Gene

Host: NC_016627:3295008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016627:3295008 Clostridium clariflavum DSM 19732 chromosome, complete genome

Host Lineage: Clostridium clariflavum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Country: Japan; Isolation: Methanogenic sludge; Temp: Thermophile; Temp: 55C. Clostridium clariflavum is a thermophilic cellulose degrader closely related to C. thermocellum, with equivalent cellulolytic activity.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
329500832961831176Polysaccharide pyruvyl transferaseQuickGO ontologyBLASTP
329620232972991098glycosyltransferaseQuickGO ontologyBLASTP
32975233298062540transcription antiterminatorQuickGO ontologyBLASTP
32982303299108879glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
32991453300005861dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
33000023300607606dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
330068333020831401capsular exopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
33021113302731621hypothetical protein
33028083303596789capsular polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
330385633060272172putative S-layer proteinQuickGO ontologyBLASTP
33064163306760345HIT family hydrolase diadenosine tetraphosphate hydrolaseQuickGO ontologyBLASTP
330692333095622640alanyl-tRNA synthetaseQuickGO ontologyBLASTP
330970533107541050putative permeaseQuickGO ontologyBLASTP
33109093311091183hypothetical protein
33111403311679540hypothetical proteinBLASTP
331203433133921359hypothetical proteinBLASTP
331347333150711599Cellulose binding domain-containing proteinQuickGO ontologyBLASTP
33150463315828783RNA polymerase sigma-I factorQuickGO ontologyBLASTP
331602333183832361response regulator containing CheY-like receiver domain and AraC-type DNA-binding domainQuickGO ontologyBLASTP