Pre_GI Gene

Host: NC_016627:4270949 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016627:4270949 Clostridium clariflavum DSM 19732 chromosome, complete genome

Host Lineage: Clostridium clariflavum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Country: Japan; Isolation: Methanogenic sludge; Temp: Thermophile; Temp: 55C. Clostridium clariflavum is a thermophilic cellulose degrader closely related to C. thermocellum, with equivalent cellulolytic activity.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
427094942737922844DNARNA helicaseQuickGO ontologyBLASTP
42738204274029210putative transcriptional regulatorQuickGO ontologyBLASTP
42778394278582744transposaseQuickGO ontologyBLASTP
42787414279049309transposaseQuickGO ontologyBLASTP
427950742808051299Retron-type reverse transcriptaseQuickGO ontologyBLASTP
428140842827061299Retron-type reverse transcriptaseQuickGO ontologyBLASTP
42834054284328924hypothetical proteinBLASTP
42843254284810486sigma-70 family RNA polymerase sigma factorQuickGO ontologyBLASTP
428519142878122622antirepressor regulating drug resistance proteinQuickGO ontologyBLASTP
42878154288177363putative transcriptional regulatorQuickGO ontologyBLASTP
428836042899281569site-specific recombinase DNA invertase PinQuickGO ontologyBLASTP
42898914290382492hypothetical proteinBLASTP
429034642919141569site-specific recombinase DNA invertase PinQuickGO ontologyBLASTP
42919764292194219hypothetical proteinBLASTP
429224842932521005LysM domain-containing proteinQuickGO ontologyBLASTP
42932494293668420toxin secretionphage lysis holinQuickGO ontologyBLASTP
429375542962232469putative glycosyl hydrolaseQuickGO ontologyBLASTP
42962204296804585hypothetical proteinBLASTP
42968824297151270
42972194297413195hypothetical proteinBLASTP
429742442987041281phage minor structural proteinQuickGO ontologyBLASTP
429875642999461191hypothetical proteinBLASTP
43000594300832774phage putative tail componentQuickGO ontologyBLASTP
430084643030322187hypothetical proteinBLASTP